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TMEM219 (transmembrane protein 219)

Identity

Alias (NCBI)IGFBP-3R
HGNC (Hugo) TMEM219
LocusID (NCBI) 124446
Atlas_Id 74885
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 29962079 and ends at 29973048 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM219 (16p11.2) / TAOK2 (16p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM219   25201
Cards
Entrez_Gene (NCBI)TMEM219    transmembrane protein 219
AliasesIGFBP-3R
GeneCards (Weizmann)TMEM219
Ensembl hg19 (Hinxton)ENSG00000149932 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149932 [Gene_View]  ENSG00000149932 [Sequence]  chr16:29962079-29973048 [Contig_View]  TMEM219 [Vega]
ICGC DataPortalENSG00000149932
TCGA cBioPortalTMEM219
AceView (NCBI)TMEM219
Genatlas (Paris)TMEM219
SOURCE (Princeton)TMEM219
Genetics Home Reference (NIH)TMEM219
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM219  -     chr16:29962079-29973048 +  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM219  -     16p11.2   [Description]    (hg19-Feb_2009)
GoldenPathTMEM219 - 16p11.2 [CytoView hg19]  TMEM219 - 16p11.2 [CytoView hg38]
ImmunoBaseENSG00000149932
Genome Data Viewer NCBITMEM219 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC017488 BC031217 BC050051 BF724791 BU857546
RefSeq transcript (Entrez)NM_001083613 NM_001369688 NM_001369689 NM_001369690 NM_194280
Consensus coding sequences : CCDS (NCBI)TMEM219
Gene ExpressionTMEM219 [ NCBI-GEO ]   TMEM219 [ EBI - ARRAY_EXPRESS ]   TMEM219 [ SEEK ]   TMEM219 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM219 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM219 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)124446
GTEX Portal (Tissue expression)TMEM219
Human Protein AtlasENSG00000149932-TMEM219 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86XT9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86XT9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86XT9
PhosPhoSitePlusQ86XT9
Domains : Interpro (EBI)TMEM248/TMEM219    TMEM248/TMEM219_dom   
Domain families : Pfam (Sanger)TMEM219 (PF14940)   
Domain families : Pfam (NCBI)pfam14940   
Conserved Domain (NCBI)TMEM219
SuperfamilyQ86XT9
AlphaFold pdb e-kbQ86XT9   
Human Protein Atlas [tissue]ENSG00000149932-TMEM219 [tissue]
HPRD18546
Protein Interaction databases
DIP (DOE-UCLA)Q86XT9
IntAct (EBI)Q86XT9
BioGRIDTMEM219
STRING (EMBL)TMEM219
ZODIACTMEM219
Ontologies - Pathways
QuickGOQ86XT9
Ontology : AmiGOprotein binding  plasma membrane  apoptotic process  integral component of membrane  regulation of apoptotic process  
Ontology : EGO-EBIprotein binding  plasma membrane  apoptotic process  integral component of membrane  regulation of apoptotic process  
NDEx NetworkTMEM219
Atlas of Cancer Signalling NetworkTMEM219
Wikipedia pathwaysTMEM219
Orthology - Evolution
OrthoDB124446
GeneTree (enSembl)ENSG00000149932
Phylogenetic Trees/Animal Genes : TreeFamTMEM219
Homologs : HomoloGeneTMEM219
Homology/Alignments : Family Browser (UCSC)TMEM219
Gene fusions - Rearrangements
Fusion : QuiverTMEM219
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM219 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM219
dbVarTMEM219
ClinVarTMEM219
MonarchTMEM219
1000_GenomesTMEM219 
Exome Variant ServerTMEM219
GNOMAD BrowserENSG00000149932
Varsome BrowserTMEM219
ACMGTMEM219 variants
VarityQ86XT9
Genomic Variants (DGV)TMEM219 [DGVbeta]
DECIPHERTMEM219 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM219 
Mutations
ICGC Data PortalTMEM219 
TCGA Data PortalTMEM219 
Broad Tumor PortalTMEM219
OASIS PortalTMEM219 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM219  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM219
Mutations and Diseases : HGMDTMEM219
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM219
DgiDB (Drug Gene Interaction Database)TMEM219
DoCM (Curated mutations)TMEM219
CIViC (Clinical Interpretations of Variants in Cancer)TMEM219
Cancer3DTMEM219
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM219
MedgenTMEM219
Genetic Testing Registry TMEM219
NextProtQ86XT9 [Medical]
GENETestsTMEM219
Target ValidationTMEM219
Huge Navigator TMEM219 [HugePedia]
ClinGenTMEM219
Clinical trials, drugs, therapy
MyCancerGenomeTMEM219
Protein Interactions : CTDTMEM219
Pharm GKB GenePA162406570
PharosQ86XT9
Clinical trialTMEM219
Miscellaneous
canSAR (ICR)TMEM219
HarmonizomeTMEM219
DataMed IndexTMEM219
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM219
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:02 CEST 2021

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