Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TMEM225B (transmembrane protein 225B)

Identity

Other aliasGS1-259H13.2
HGNC (Hugo) TMEM225B
LocusID (NCBI) 100289187
Atlas_Id 79193
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 99598066 and ends at 99611045 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM225B   53075
Cards
Entrez_Gene (NCBI)TMEM225B  100289187  transmembrane protein 225B
AliasesGS1-259H13.2
GeneCards (Weizmann)TMEM225B
Ensembl hg19 (Hinxton)ENSG00000244219 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244219 [Gene_View]  chr7:99598066-99611045 [Contig_View]  TMEM225B [Vega]
ICGC DataPortalENSG00000244219
TCGA cBioPortalTMEM225B
AceView (NCBI)TMEM225B
Genatlas (Paris)TMEM225B
WikiGenes100289187
SOURCE (Princeton)TMEM225B
Genetics Home Reference (NIH)TMEM225B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM225B  -     chr7:99598066-99611045 +  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM225B  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM225B - 7q22.1 [CytoView hg19]  TMEM225B - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBITMEM225B [Mapview hg19]  TMEM225B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA781117 AI028251 BG459722 BG461486 BI559535
RefSeq transcript (Entrez)NM_001195541 NM_001195542 NM_001195543
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM225B
Cluster EST : UnigeneHs.729333 [ NCBI ]
CGAP (NCI)Hs.729333
Alternative Splicing GalleryENSG00000244219
Gene ExpressionTMEM225B [ NCBI-GEO ]   TMEM225B [ EBI - ARRAY_EXPRESS ]   TMEM225B [ SEEK ]   TMEM225B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM225B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100289187
GTEX Portal (Tissue expression)TMEM225B
Human Protein AtlasENSG00000244219-TMEM225B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM225B
DMDM Disease mutations100289187
Blocks (Seattle)TMEM225B
Human Protein Atlas [tissue]ENSG00000244219-TMEM225B [tissue]
IPIIPI00976864   
Protein Interaction databases
FunCoupENSG00000244219
BioGRIDTMEM225B
STRING (EMBL)TMEM225B
ZODIACTMEM225B
Ontologies - Pathways
Huge Navigator TMEM225B [HugePedia]
snp3D : Map Gene to Disease100289187
BioCentury BCIQTMEM225B
ClinGenTMEM225B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100289187
Clinical trialTMEM225B
Miscellaneous
canSAR (ICR)TMEM225B (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM225B
EVEXTMEM225B
GoPubMedTMEM225B
iHOPTMEM225B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:17:29 CET 2017

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