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TMEM229B (transmembrane protein 229B)

Identity

Alias (NCBI)C14orf83
HGNC (Hugo) TMEM229B
HGNC Alias symbFLJ33387
HGNC Previous nameC14orf83
HGNC Previous namechromosome 14 open reading frame 83
LocusID (NCBI) 161145
Atlas_Id 74893
Location 14q24.1  [Link to chromosome band 14q24]
Location_base_pair Starts at 67470266 and ends at 67515304 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HUWE1 (Xp11.22) / TMEM229B (14q24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM229B   20130
Cards
Entrez_Gene (NCBI)TMEM229B    transmembrane protein 229B
AliasesC14orf83
GeneCards (Weizmann)TMEM229B
Ensembl hg19 (Hinxton)ENSG00000198133 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198133 [Gene_View]  ENSG00000198133 [Sequence]  chr14:67470266-67515304 [Contig_View]  TMEM229B [Vega]
ICGC DataPortalENSG00000198133
TCGA cBioPortalTMEM229B
AceView (NCBI)TMEM229B
Genatlas (Paris)TMEM229B
SOURCE (Princeton)TMEM229B
Genetics Home Reference (NIH)TMEM229B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM229B  -     chr14:67470266-67515304 -  14q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM229B  -     14q24.1   [Description]    (hg19-Feb_2009)
GoldenPathTMEM229B - 14q24.1 [CytoView hg19]  TMEM229B - 14q24.1 [CytoView hg38]
ImmunoBaseENSG00000198133
Genome Data Viewer NCBITMEM229B [Mapview hg19]  
OMIM619022   
Gene and transcription
Genbank (Entrez)AK056646 AK074690 AK090706 BC104940 BC104942
RefSeq transcript (Entrez)NM_001348541 NM_001348542 NM_001348543 NM_001348544 NM_001348546 NM_001348547 NM_001348548 NM_001348549 NM_182526
Consensus coding sequences : CCDS (NCBI)TMEM229B
Gene ExpressionTMEM229B [ NCBI-GEO ]   TMEM229B [ EBI - ARRAY_EXPRESS ]   TMEM229B [ SEEK ]   TMEM229B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM229B [ Firebrowse - Broad ]
GenevisibleExpression of TMEM229B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)161145
GTEX Portal (Tissue expression)TMEM229B
Human Protein AtlasENSG00000198133-TMEM229B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBD8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBD8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBD8
PhosPhoSitePlusQ8NBD8
Domains : Interpro (EBI)CmpB_TMEM229   
Domain families : Pfam (Sanger)ABC_trans_CmpB (PF06541)   
Domain families : Pfam (NCBI)pfam06541   
Conserved Domain (NCBI)TMEM229B
SuperfamilyQ8NBD8
AlphaFold pdb e-kbQ8NBD8   
Human Protein Atlas [tissue]ENSG00000198133-TMEM229B [tissue]
HPRD08157
Protein Interaction databases
DIP (DOE-UCLA)Q8NBD8
IntAct (EBI)Q8NBD8
BioGRIDTMEM229B
STRING (EMBL)TMEM229B
ZODIACTMEM229B
Ontologies - Pathways
QuickGOQ8NBD8
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkTMEM229B
Atlas of Cancer Signalling NetworkTMEM229B
Wikipedia pathwaysTMEM229B
Orthology - Evolution
OrthoDB161145
GeneTree (enSembl)ENSG00000198133
Phylogenetic Trees/Animal Genes : TreeFamTMEM229B
Homologs : HomoloGeneTMEM229B
Homology/Alignments : Family Browser (UCSC)TMEM229B
Gene fusions - Rearrangements
Fusion : QuiverTMEM229B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM229B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM229B
dbVarTMEM229B
ClinVarTMEM229B
MonarchTMEM229B
1000_GenomesTMEM229B 
Exome Variant ServerTMEM229B
GNOMAD BrowserENSG00000198133
Varsome BrowserTMEM229B
ACMGTMEM229B variants
VarityQ8NBD8
Genomic Variants (DGV)TMEM229B [DGVbeta]
DECIPHERTMEM229B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM229B 
Mutations
ICGC Data PortalTMEM229B 
TCGA Data PortalTMEM229B 
Broad Tumor PortalTMEM229B
OASIS PortalTMEM229B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM229B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM229B
Mutations and Diseases : HGMDTMEM229B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM229B
DgiDB (Drug Gene Interaction Database)TMEM229B
DoCM (Curated mutations)TMEM229B
CIViC (Clinical Interpretations of Variants in Cancer)TMEM229B
Cancer3DTMEM229B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM619022   
Orphanet
DisGeNETTMEM229B
MedgenTMEM229B
Genetic Testing Registry TMEM229B
NextProtQ8NBD8 [Medical]
GENETestsTMEM229B
Target ValidationTMEM229B
Huge Navigator TMEM229B [HugePedia]
ClinGenTMEM229B
Clinical trials, drugs, therapy
MyCancerGenomeTMEM229B
Protein Interactions : CTDTMEM229B
Pharm GKB GenePA165479330
PharosQ8NBD8
Clinical trialTMEM229B
Miscellaneous
canSAR (ICR)TMEM229B
HarmonizomeTMEM229B
DataMed IndexTMEM229B
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM229B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:03 CEST 2021

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