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TMEM231 (transmembrane protein 231)

Identity

Alias (NCBI)ALYE870
JBTS20
MKS11
PRO1886
HGNC (Hugo) TMEM231
HGNC Alias symbFLJ22167
ALYE870
PRO1886
JBTS20
MKS11
LocusID (NCBI) 79583
Atlas_Id 74895
Location 16q23.1  [Link to chromosome band 16q23]
Location_base_pair Starts at 75536741 and ends at 75556252 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CHST5 (16q23.1) / TMEM231 (16q23.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM231   37234
Cards
Entrez_Gene (NCBI)TMEM231    transmembrane protein 231
AliasesALYE870; JBTS20; MKS11; PRO1886
GeneCards (Weizmann)TMEM231
Ensembl hg19 (Hinxton)ENSG00000205084 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205084 [Gene_View]  ENSG00000205084 [Sequence]  chr16:75536741-75556252 [Contig_View]  TMEM231 [Vega]
ICGC DataPortalENSG00000205084
TCGA cBioPortalTMEM231
AceView (NCBI)TMEM231
Genatlas (Paris)TMEM231
SOURCE (Princeton)TMEM231
Genetics Home Reference (NIH)TMEM231
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM231  -     chr16:75536741-75556252 -  16q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM231  -     16q23.1   [Description]    (hg19-Feb_2009)
GoldenPathTMEM231 - 16q23.1 [CytoView hg19]  TMEM231 - 16q23.1 [CytoView hg38]
ImmunoBaseENSG00000205084
Genome Data Viewer NCBITMEM231 [Mapview hg19]  
OMIM614949   614970   615397   
Gene and transcription
Genbank (Entrez)AK025820 AK057689 AK096650 AK290483 AK298994
RefSeq transcript (Entrez)NM_001077416 NM_001077418
Consensus coding sequences : CCDS (NCBI)TMEM231
Gene ExpressionTMEM231 [ NCBI-GEO ]   TMEM231 [ EBI - ARRAY_EXPRESS ]   TMEM231 [ SEEK ]   TMEM231 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM231 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM231 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79583
GTEX Portal (Tissue expression)TMEM231
Human Protein AtlasENSG00000205084-TMEM231 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H6L2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H6L2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H6L2
PhosPhoSitePlusQ9H6L2
Domains : Interpro (EBI)TMEM231   
Domain families : Pfam (Sanger)TM231 (PF10149)   
Domain families : Pfam (NCBI)pfam10149   
Conserved Domain (NCBI)TMEM231
SuperfamilyQ9H6L2
AlphaFold pdb e-kbQ9H6L2   
Human Protein Atlas [tissue]ENSG00000205084-TMEM231 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9H6L2
IntAct (EBI)Q9H6L2
BioGRIDTMEM231
STRING (EMBL)TMEM231
ZODIACTMEM231
Ontologies - Pathways
QuickGOQ9H6L2
Ontology : AmiGOin utero embryonic development  vasculature development  protein binding  smoothened signaling pathway  integral component of membrane  regulation of protein localization  ciliary transition zone  ciliary transition zone  MKS complex  embryonic digit morphogenesis  camera-type eye development  ciliary membrane  ciliary membrane  cilium assembly  cilium assembly  neuroepithelial cell differentiation  
Ontology : EGO-EBIin utero embryonic development  vasculature development  protein binding  smoothened signaling pathway  integral component of membrane  regulation of protein localization  ciliary transition zone  ciliary transition zone  MKS complex  embryonic digit morphogenesis  camera-type eye development  ciliary membrane  ciliary membrane  cilium assembly  cilium assembly  neuroepithelial cell differentiation  
NDEx NetworkTMEM231
Atlas of Cancer Signalling NetworkTMEM231
Wikipedia pathwaysTMEM231
Orthology - Evolution
OrthoDB79583
GeneTree (enSembl)ENSG00000205084
Phylogenetic Trees/Animal Genes : TreeFamTMEM231
Homologs : HomoloGeneTMEM231
Homology/Alignments : Family Browser (UCSC)TMEM231
Gene fusions - Rearrangements
Fusion : QuiverTMEM231
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM231 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM231
dbVarTMEM231
ClinVarTMEM231
MonarchTMEM231
1000_GenomesTMEM231 
Exome Variant ServerTMEM231
GNOMAD BrowserENSG00000205084
Varsome BrowserTMEM231
ACMGTMEM231 variants
VarityQ9H6L2
Genomic Variants (DGV)TMEM231 [DGVbeta]
DECIPHERTMEM231 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM231 
Mutations
ICGC Data PortalTMEM231 
TCGA Data PortalTMEM231 
Broad Tumor PortalTMEM231
OASIS PortalTMEM231 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM231  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM231
Mutations and Diseases : HGMDTMEM231
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM231
DgiDB (Drug Gene Interaction Database)TMEM231
DoCM (Curated mutations)TMEM231
CIViC (Clinical Interpretations of Variants in Cancer)TMEM231
Cancer3DTMEM231
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614949    614970    615397   
Orphanet280    519   
DisGeNETTMEM231
MedgenTMEM231
Genetic Testing Registry TMEM231
NextProtQ9H6L2 [Medical]
GENETestsTMEM231
Target ValidationTMEM231
Huge Navigator TMEM231 [HugePedia]
ClinGenTMEM231
Clinical trials, drugs, therapy
MyCancerGenomeTMEM231
Protein Interactions : CTDTMEM231
Pharm GKB GenePA165450754
PharosQ9H6L2
Clinical trialTMEM231
Miscellaneous
canSAR (ICR)TMEM231
HarmonizomeTMEM231
DataMed IndexTMEM231
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM231
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:04 CEST 2021

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