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TMEM232 (transmembrane protein 232)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM232
HGNC Alias symbFLJ43080
LocusID (NCBI) 642987
Atlas_Id 74896
Location 5q22.1  [Link to chromosome band 5q22]
Location_base_pair Starts at 110419496 and ends at 110726671 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
COTL1 (16q24.1)::TMEM232 (5q22.1)KIAA2026 (9p24.1)::TMEM232 (5q22.1)MMP12 (11q22.2)::TMEM232 (5q22.1)
TMEM232 (5q22.1)::ANKRA2 (5q13.2)TMEM232 (5q22.1)::FAHD1 (16p13.3)TMEM232 (5q22.1)::USP22 (17p11.2)
UTRN (6q24.2)::TMEM232 (5q22.1)ZC3H13 (13q14.13)::TMEM232 (5q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM232   37270
Cards
Entrez_Gene (NCBI)TMEM232    transmembrane protein 232
Aliases
GeneCards (Weizmann)TMEM232
Ensembl hg19 (Hinxton)ENSG00000186952 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186952 [Gene_View]  ENSG00000186952 [Sequence]  chr5:110419496-110726671 [Contig_View]  TMEM232 [Vega]
ICGC DataPortalENSG00000186952
TCGA cBioPortalTMEM232
AceView (NCBI)TMEM232
Genatlas (Paris)TMEM232
SOURCE (Princeton)TMEM232
Genetics Home Reference (NIH)TMEM232
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM232  -     chr5:110419496-110726671 -  5q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM232  -     5q22.1   [Description]    (hg19-Feb_2009)
GoldenPathTMEM232 - 5q22.1 [CytoView hg19]  TMEM232 - 5q22.1 [CytoView hg38]
ImmunoBaseENSG00000186952
Genome Data Viewer NCBITMEM232 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK125070 AK296542 BC042563 BM465182 BM978936
RefSeq transcript (Entrez)NM_001039763
Consensus coding sequences : CCDS (NCBI)TMEM232
Gene ExpressionTMEM232 [ NCBI-GEO ]   TMEM232 [ EBI - ARRAY_EXPRESS ]   TMEM232 [ SEEK ]   TMEM232 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM232 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM232 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)642987
GTEX Portal (Tissue expression)TMEM232
Human Protein AtlasENSG00000186952-TMEM232 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtC9JQI7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtC9JQI7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProC9JQI7
PhosPhoSitePlusC9JQI7
Domains : Interpro (EBI)TMEM232   
Domain families : Pfam (Sanger)TMEM232 (PF15877)   
Domain families : Pfam (NCBI)pfam15877   
Conserved Domain (NCBI)TMEM232
SuperfamilyC9JQI7
AlphaFold pdb e-kbC9JQI7   
Human Protein Atlas [tissue]ENSG00000186952-TMEM232 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)C9JQI7
IntAct (EBI)C9JQI7
BioGRIDTMEM232
STRING (EMBL)TMEM232
ZODIACTMEM232
Ontologies - Pathways
QuickGOC9JQI7
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM232
Atlas of Cancer Signalling NetworkTMEM232
Wikipedia pathwaysTMEM232
Orthology - Evolution
OrthoDB642987
GeneTree (enSembl)ENSG00000186952
Phylogenetic Trees/Animal Genes : TreeFamTMEM232
Homologs : HomoloGeneTMEM232
Homology/Alignments : Family Browser (UCSC)TMEM232
Gene fusions - Rearrangements
Fusion : QuiverTMEM232
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM232 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM232
dbVarTMEM232
ClinVarTMEM232
MonarchTMEM232
1000_GenomesTMEM232 
Exome Variant ServerTMEM232
GNOMAD BrowserENSG00000186952
Varsome BrowserTMEM232
ACMGTMEM232 variants
VarityC9JQI7
Genomic Variants (DGV)TMEM232 [DGVbeta]
DECIPHERTMEM232 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM232 
Mutations
ICGC Data PortalTMEM232 
TCGA Data PortalTMEM232 
Broad Tumor PortalTMEM232
OASIS PortalTMEM232 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM232  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM232
Mutations and Diseases : HGMDTMEM232
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM232
DgiDB (Drug Gene Interaction Database)TMEM232
DoCM (Curated mutations)TMEM232
CIViC (Clinical Interpretations of Variants in Cancer)TMEM232
Cancer3DTMEM232
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM232
MedgenTMEM232
Genetic Testing Registry TMEM232
NextProtC9JQI7 [Medical]
GENETestsTMEM232
Target ValidationTMEM232
Huge Navigator TMEM232 [HugePedia]
ClinGenTMEM232
Clinical trials, drugs, therapy
MyCancerGenomeTMEM232
Protein Interactions : CTDTMEM232
Pharm GKB GenePA165660571
PharosC9JQI7
Clinical trialTMEM232
Miscellaneous
canSAR (ICR)TMEM232
HarmonizomeTMEM232
ARCHS4TMEM232
DataMed IndexTMEM232
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM232
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:29:39 CET 2022

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