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TMEM233 (transmembrane protein 233)

Identity

Alias (NCBI)DSPB2
IFITMD2
HGNC (Hugo) TMEM233
HGNC Alias symbIFITMD2
HGNC Alias nameinterferon induced transmembrane protein domain containing 2
LocusID (NCBI) 387890
Atlas_Id 74897
Location 12q24.23  [Link to chromosome band 12q24]
Location_base_pair Starts at 119593774 and ends at 119643075 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM233 (12q24.23) / BORCS5 (12p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM233   37219
Cards
Entrez_Gene (NCBI)TMEM233    transmembrane protein 233
AliasesDSPB2; IFITMD2
GeneCards (Weizmann)TMEM233
Ensembl hg19 (Hinxton)ENSG00000224982 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224982 [Gene_View]  ENSG00000224982 [Sequence]  chr12:119593774-119643075 [Contig_View]  TMEM233 [Vega]
ICGC DataPortalENSG00000224982
TCGA cBioPortalTMEM233
AceView (NCBI)TMEM233
Genatlas (Paris)TMEM233
SOURCE (Princeton)TMEM233
Genetics Home Reference (NIH)TMEM233
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM233  -     chr12:119593774-119643075 +  12q24.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM233  -     12q24.23   [Description]    (hg19-Feb_2009)
GoldenPathTMEM233 - 12q24.23 [CytoView hg19]  TMEM233 - 12q24.23 [CytoView hg38]
ImmunoBaseENSG00000224982
Genome Data Viewer NCBITMEM233 [Mapview hg19]  
OMIM618296   
Gene and transcription
Genbank (Entrez)AA476740 AK296289 DC315309 DC358991 GD264605
RefSeq transcript (Entrez)NM_001136534
Consensus coding sequences : CCDS (NCBI)TMEM233
Gene ExpressionTMEM233 [ NCBI-GEO ]   TMEM233 [ EBI - ARRAY_EXPRESS ]   TMEM233 [ SEEK ]   TMEM233 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM233 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM233 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)387890
GTEX Portal (Tissue expression)TMEM233
Human Protein AtlasENSG00000224982-TMEM233 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtB4DJY2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB4DJY2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB4DJY2
PhosPhoSitePlusB4DJY2
Domains : Interpro (EBI)CD225/Dispanin_fam   
Domain families : Pfam (Sanger)CD225 (PF04505)   
Domain families : Pfam (NCBI)pfam04505   
Conserved Domain (NCBI)TMEM233
SuperfamilyB4DJY2
AlphaFold pdb e-kbB4DJY2   
Human Protein Atlas [tissue]ENSG00000224982-TMEM233 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)B4DJY2
IntAct (EBI)B4DJY2
BioGRIDTMEM233
STRING (EMBL)TMEM233
ZODIACTMEM233
Ontologies - Pathways
QuickGOB4DJY2
Ontology : AmiGOmembrane  integral component of membrane  
Ontology : EGO-EBImembrane  integral component of membrane  
NDEx NetworkTMEM233
Atlas of Cancer Signalling NetworkTMEM233
Wikipedia pathwaysTMEM233
Orthology - Evolution
OrthoDB387890
GeneTree (enSembl)ENSG00000224982
Phylogenetic Trees/Animal Genes : TreeFamTMEM233
Homologs : HomoloGeneTMEM233
Homology/Alignments : Family Browser (UCSC)TMEM233
Gene fusions - Rearrangements
Fusion : QuiverTMEM233
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM233 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM233
dbVarTMEM233
ClinVarTMEM233
MonarchTMEM233
1000_GenomesTMEM233 
Exome Variant ServerTMEM233
GNOMAD BrowserENSG00000224982
Varsome BrowserTMEM233
ACMGTMEM233 variants
VarityB4DJY2
Genomic Variants (DGV)TMEM233 [DGVbeta]
DECIPHERTMEM233 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM233 
Mutations
ICGC Data PortalTMEM233 
TCGA Data PortalTMEM233 
Broad Tumor PortalTMEM233
OASIS PortalTMEM233 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM233  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM233
Mutations and Diseases : HGMDTMEM233
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM233
DgiDB (Drug Gene Interaction Database)TMEM233
DoCM (Curated mutations)TMEM233
CIViC (Clinical Interpretations of Variants in Cancer)TMEM233
Cancer3DTMEM233
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM618296   
Orphanet
DisGeNETTMEM233
MedgenTMEM233
Genetic Testing Registry TMEM233
NextProtB4DJY2 [Medical]
GENETestsTMEM233
Target ValidationTMEM233
Huge Navigator TMEM233 [HugePedia]
ClinGenTMEM233
Clinical trials, drugs, therapy
MyCancerGenomeTMEM233
Protein Interactions : CTDTMEM233
Pharm GKB GenePA165513584
PharosB4DJY2
Clinical trialTMEM233
Miscellaneous
canSAR (ICR)TMEM233
HarmonizomeTMEM233
DataMed IndexTMEM233
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM233
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:04 CEST 2021

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