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TMEM234 (transmembrane protein 234)

Identity

Alias_namesC1orf91
chromosome 1 open reading frame 91
Alias_symbol (synonym)RP4-622L5
dJ622L5.7
FLJ90779
Other aliasAASL548
PRO1105
HGNC (Hugo) TMEM234
LocusID (NCBI) 56063
Atlas_Id 74898
Location 1p35.2  [Link to chromosome band 1p35]
Location_base_pair Starts at 32216197 and ends at 32222371 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM234   28837
Cards
Entrez_Gene (NCBI)TMEM234  56063  transmembrane protein 234
AliasesAASL548; C1orf91; PRO1105; RP4-622L5; 
dJ622L5.7
GeneCards (Weizmann)TMEM234
Ensembl hg19 (Hinxton)ENSG00000160055 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160055 [Gene_View]  chr1:32216197-32222371 [Contig_View]  TMEM234 [Vega]
ICGC DataPortalENSG00000160055
TCGA cBioPortalTMEM234
AceView (NCBI)TMEM234
Genatlas (Paris)TMEM234
WikiGenes56063
SOURCE (Princeton)TMEM234
Genetics Home Reference (NIH)TMEM234
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM234  -     chr1:32216197-32222371 -  1p35.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM234  -     1p35.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM234 - 1p35.2 [CytoView hg19]  TMEM234 - 1p35.2 [CytoView hg38]
Mapping of homologs : NCBITMEM234 [Mapview hg19]  TMEM234 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF258548 AK075260 AK295232 AK312046 AL512700
RefSeq transcript (Entrez)NM_019118
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM234
Cluster EST : UnigeneHs.272299 [ NCBI ]
CGAP (NCI)Hs.272299
Alternative Splicing GalleryENSG00000160055
Gene ExpressionTMEM234 [ NCBI-GEO ]   TMEM234 [ EBI - ARRAY_EXPRESS ]   TMEM234 [ SEEK ]   TMEM234 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM234 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56063
GTEX Portal (Tissue expression)TMEM234
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WY98   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WY98  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WY98
Splice isoforms : SwissVarQ8WY98
PhosPhoSitePlusQ8WY98
Domains : Interpro (EBI)TMEM234   
Domain families : Pfam (Sanger)TMEM234 (PF10639)   
Domain families : Pfam (NCBI)pfam10639   
Conserved Domain (NCBI)TMEM234
DMDM Disease mutations56063
Blocks (Seattle)TMEM234
SuperfamilyQ8WY98
Human Protein AtlasENSG00000160055
Peptide AtlasQ8WY98
HPRD15270
IPIIPI00853211   IPI00644491   IPI00292222   IPI00385734   IPI00910931   IPI00983180   
Protein Interaction databases
DIP (DOE-UCLA)Q8WY98
IntAct (EBI)Q8WY98
FunCoupENSG00000160055
BioGRIDTMEM234
STRING (EMBL)TMEM234
ZODIACTMEM234
Ontologies - Pathways
QuickGOQ8WY98
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkTMEM234
Atlas of Cancer Signalling NetworkTMEM234
Wikipedia pathwaysTMEM234
Orthology - Evolution
OrthoDB56063
GeneTree (enSembl)ENSG00000160055
Phylogenetic Trees/Animal Genes : TreeFamTMEM234
HOVERGENQ8WY98
HOGENOMQ8WY98
Homologs : HomoloGeneTMEM234
Homology/Alignments : Family Browser (UCSC)TMEM234
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM234 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM234
dbVarTMEM234
ClinVarTMEM234
1000_GenomesTMEM234 
Exome Variant ServerTMEM234
ExAC (Exome Aggregation Consortium)TMEM234 (select the gene name)
Genetic variants : HAPMAP56063
Genomic Variants (DGV)TMEM234 [DGVbeta]
DECIPHERTMEM234 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM234 
Mutations
ICGC Data PortalTMEM234 
TCGA Data PortalTMEM234 
Broad Tumor PortalTMEM234
OASIS PortalTMEM234 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM234  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM234
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM234
DgiDB (Drug Gene Interaction Database)TMEM234
DoCM (Curated mutations)TMEM234 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM234 (select a term)
intoGenTMEM234
Cancer3DTMEM234(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM234
Genetic Testing Registry TMEM234
NextProtQ8WY98 [Medical]
TSGene56063
GENETestsTMEM234
Target ValidationTMEM234
Huge Navigator TMEM234 [HugePedia]
snp3D : Map Gene to Disease56063
BioCentury BCIQTMEM234
ClinGenTMEM234
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56063
Chemical/Pharm GKB GenePA142672475
Clinical trialTMEM234
Miscellaneous
canSAR (ICR)TMEM234 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM234
EVEXTMEM234
GoPubMedTMEM234
iHOPTMEM234
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed May 31 15:46:11 CEST 2017

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