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TMEM237 (transmembrane protein 237)

Identity

Alias_namesALS2CR4
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
Alias_symbol (synonym)JBTS14
Other alias
HGNC (Hugo) TMEM237
LocusID (NCBI) 65062
Atlas_Id 74901
Location 2q33.1  [Link to chromosome band 2q33]
Location_base_pair Starts at 201620184 and ends at 201643529 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM237   14432
Cards
Entrez_Gene (NCBI)TMEM237  65062  transmembrane protein 237
AliasesALS2CR4; JBTS14
GeneCards (Weizmann)TMEM237
Ensembl hg19 (Hinxton)ENSG00000155755 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155755 [Gene_View]  chr2:201620184-201643529 [Contig_View]  TMEM237 [Vega]
ICGC DataPortalENSG00000155755
TCGA cBioPortalTMEM237
AceView (NCBI)TMEM237
Genatlas (Paris)TMEM237
WikiGenes65062
SOURCE (Princeton)TMEM237
Genetics Home Reference (NIH)TMEM237
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM237  -     chr2:201620184-201643529 -  2q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM237  -     2q33.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM237 - 2q33.1 [CytoView hg19]  TMEM237 - 2q33.1 [CytoView hg38]
Mapping of homologs : NCBITMEM237 [Mapview hg19]  TMEM237 [Mapview hg38]
OMIM614423   614424   
Gene and transcription
Genbank (Entrez)AB053301 AF212043 AK022836 AK090601 AK125841
RefSeq transcript (Entrez)NM_001044385 NM_152388
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM237
Cluster EST : UnigeneHs.12319 [ NCBI ]
CGAP (NCI)Hs.12319
Alternative Splicing GalleryENSG00000155755
Gene ExpressionTMEM237 [ NCBI-GEO ]   TMEM237 [ EBI - ARRAY_EXPRESS ]   TMEM237 [ SEEK ]   TMEM237 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM237 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)65062
GTEX Portal (Tissue expression)TMEM237
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96Q45   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96Q45  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96Q45
Splice isoforms : SwissVarQ96Q45
PhosPhoSitePlusQ96Q45
Domains : Interpro (EBI)TMEM237   
Domain families : Pfam (Sanger)TMEM237 (PF15383)   
Domain families : Pfam (NCBI)pfam15383   
Conserved Domain (NCBI)TMEM237
DMDM Disease mutations65062
Blocks (Seattle)TMEM237
SuperfamilyQ96Q45
Human Protein AtlasENSG00000155755
Peptide AtlasQ96Q45
HPRD12448
IPIIPI00044683   IPI00658092   IPI00967608   IPI01009294   IPI00383226   IPI00977879   IPI00982086   IPI00927704   
Protein Interaction databases
DIP (DOE-UCLA)Q96Q45
IntAct (EBI)Q96Q45
FunCoupENSG00000155755
BioGRIDTMEM237
STRING (EMBL)TMEM237
ZODIACTMEM237
Ontologies - Pathways
QuickGOQ96Q45
Ontology : AmiGOmembrane  integral component of membrane  regulation of Wnt signaling pathway  ciliary transition zone  cilium assembly  
Ontology : EGO-EBImembrane  integral component of membrane  regulation of Wnt signaling pathway  ciliary transition zone  cilium assembly  
NDEx NetworkTMEM237
Atlas of Cancer Signalling NetworkTMEM237
Wikipedia pathwaysTMEM237
Orthology - Evolution
OrthoDB65062
GeneTree (enSembl)ENSG00000155755
Phylogenetic Trees/Animal Genes : TreeFamTMEM237
HOVERGENQ96Q45
HOGENOMQ96Q45
Homologs : HomoloGeneTMEM237
Homology/Alignments : Family Browser (UCSC)TMEM237
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM237 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM237
dbVarTMEM237
ClinVarTMEM237
1000_GenomesTMEM237 
Exome Variant ServerTMEM237
ExAC (Exome Aggregation Consortium)TMEM237 (select the gene name)
Genetic variants : HAPMAP65062
Genomic Variants (DGV)TMEM237 [DGVbeta]
DECIPHERTMEM237 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM237 
Mutations
ICGC Data PortalTMEM237 
TCGA Data PortalTMEM237 
Broad Tumor PortalTMEM237
OASIS PortalTMEM237 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM237  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM237
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Eye diseases - LOVD
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch TMEM237
DgiDB (Drug Gene Interaction Database)TMEM237
DoCM (Curated mutations)TMEM237 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM237 (select a term)
intoGenTMEM237
Cancer3DTMEM237(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614423    614424   
Orphanet519    1022    18917   
MedgenTMEM237
Genetic Testing Registry TMEM237
NextProtQ96Q45 [Medical]
TSGene65062
GENETestsTMEM237
Target ValidationTMEM237
Huge Navigator TMEM237 [HugePedia]
snp3D : Map Gene to Disease65062
BioCentury BCIQTMEM237
ClinGenTMEM237
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD65062
Chemical/Pharm GKB GenePA24745
Clinical trialTMEM237
Miscellaneous
canSAR (ICR)TMEM237 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM237
EVEXTMEM237
GoPubMedTMEM237
iHOPTMEM237
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:53 CEST 2017

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