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TMEM243 (transmembrane protein 243)

Identity

Alias_namesC7orf23
chromosome 7 open reading frame 23
transmembrane protein 243, mitochondrial
Alias_symbol (synonym)MGC4175
MM-TRAG
Other aliasMMTRAG
HGNC (Hugo) TMEM243
LocusID (NCBI) 79161
Atlas_Id 74906
Location 7q21.12  [Link to chromosome band 7q21]
Location_base_pair Starts at 87196162 and ends at 87220587 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GLI3 (7p14.1) / TMEM243 (7q21.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM243   21707
Cards
Entrez_Gene (NCBI)TMEM243  79161  transmembrane protein 243
AliasesC7orf23; MM-TRAG; MMTRAG
GeneCards (Weizmann)TMEM243
Ensembl hg19 (Hinxton)ENSG00000135185 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135185 [Gene_View]  chr7:87196162-87220587 [Contig_View]  TMEM243 [Vega]
ICGC DataPortalENSG00000135185
TCGA cBioPortalTMEM243
AceView (NCBI)TMEM243
Genatlas (Paris)TMEM243
WikiGenes79161
SOURCE (Princeton)TMEM243
Genetics Home Reference (NIH)TMEM243
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM243  -     chr7:87196162-87220587 -  7q21.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM243  -     7q21.12   [Description]    (hg19-Feb_2009)
EnsemblTMEM243 - 7q21.12 [CytoView hg19]  TMEM243 - 7q21.12 [CytoView hg38]
Mapping of homologs : NCBITMEM243 [Mapview hg19]  TMEM243 [Mapview hg38]
OMIM616993   
Gene and transcription
Genbank (Entrez)AK313794 AL711214 BC002837 BP236768 BT006973
RefSeq transcript (Entrez)NM_001329472 NM_001329473 NM_001329474 NM_001329475 NM_024315
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM243
Cluster EST : UnigeneHs.735745 [ NCBI ]
CGAP (NCI)Hs.735745
Alternative Splicing GalleryENSG00000135185
Gene ExpressionTMEM243 [ NCBI-GEO ]   TMEM243 [ EBI - ARRAY_EXPRESS ]   TMEM243 [ SEEK ]   TMEM243 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM243 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79161
GTEX Portal (Tissue expression)TMEM243
Human Protein AtlasENSG00000135185-TMEM243 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BU79   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BU79  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BU79
Splice isoforms : SwissVarQ9BU79
PhosPhoSitePlusQ9BU79
Domains : Interpro (EBI)DUF2678   
Domain families : Pfam (Sanger)DUF2678 (PF10856)   
Domain families : Pfam (NCBI)pfam10856   
Domain structure : Prodom (Prabi Lyon)PD456474 (PD456474)   
Conserved Domain (NCBI)TMEM243
DMDM Disease mutations79161
Blocks (Seattle)TMEM243
SuperfamilyQ9BU79
Human Protein Atlas [tissue]ENSG00000135185-TMEM243 [tissue]
Peptide AtlasQ9BU79
HPRD12911
IPIIPI00013331   IPI00927748   IPI00926699   
Protein Interaction databases
DIP (DOE-UCLA)Q9BU79
IntAct (EBI)Q9BU79
FunCoupENSG00000135185
BioGRIDTMEM243
STRING (EMBL)TMEM243
ZODIACTMEM243
Ontologies - Pathways
QuickGOQ9BU79
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM243
Atlas of Cancer Signalling NetworkTMEM243
Wikipedia pathwaysTMEM243
Orthology - Evolution
OrthoDB79161
GeneTree (enSembl)ENSG00000135185
Phylogenetic Trees/Animal Genes : TreeFamTMEM243
HOVERGENQ9BU79
HOGENOMQ9BU79
Homologs : HomoloGeneTMEM243
Homology/Alignments : Family Browser (UCSC)TMEM243
Gene fusions - Rearrangements
Tumor Fusion PortalTMEM243
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM243 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM243
dbVarTMEM243
ClinVarTMEM243
1000_GenomesTMEM243 
Exome Variant ServerTMEM243
ExAC (Exome Aggregation Consortium)ENSG00000135185
GNOMAD BrowserENSG00000135185
Genetic variants : HAPMAP79161
Genomic Variants (DGV)TMEM243 [DGVbeta]
DECIPHERTMEM243 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM243 
Mutations
ICGC Data PortalTMEM243 
TCGA Data PortalTMEM243 
Broad Tumor PortalTMEM243
OASIS PortalTMEM243 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM243
BioMutasearch TMEM243
DgiDB (Drug Gene Interaction Database)TMEM243
DoCM (Curated mutations)TMEM243 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM243 (select a term)
intoGenTMEM243
Cancer3DTMEM243(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616993   
Orphanet
DisGeNETTMEM243
MedgenTMEM243
Genetic Testing Registry TMEM243
NextProtQ9BU79 [Medical]
TSGene79161
GENETestsTMEM243
Target ValidationTMEM243
Huge Navigator TMEM243 [HugePedia]
snp3D : Map Gene to Disease79161
BioCentury BCIQTMEM243
ClinGenTMEM243
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79161
Chemical/Pharm GKB GenePA134985688
Clinical trialTMEM243
Miscellaneous
canSAR (ICR)TMEM243 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM243
EVEXTMEM243
GoPubMedTMEM243
iHOPTMEM243
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:18:48 CET 2017

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