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TMEM244 (transmembrane protein 244)

Identity

Alias_namesC6orf191
chromosome 6 open reading frame 191
Alias_symbol (synonym)bA174C7.4
Other alias
HGNC (Hugo) TMEM244
LocusID (NCBI) 253582
Atlas_Id 74907
Location 6q22.33  [Link to chromosome band 6q22]
Location_base_pair Starts at 129831244 and ends at 129861271 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM244   21571
Cards
Entrez_Gene (NCBI)TMEM244  253582  transmembrane protein 244
AliasesC6orf191; bA174C7.4
GeneCards (Weizmann)TMEM244
Ensembl hg19 (Hinxton)ENSG00000203756 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203756 [Gene_View]  ENSG00000203756 [Sequence]  chr6:129831244-129861271 [Contig_View]  TMEM244 [Vega]
ICGC DataPortalENSG00000203756
TCGA cBioPortalTMEM244
AceView (NCBI)TMEM244
Genatlas (Paris)TMEM244
WikiGenes253582
SOURCE (Princeton)TMEM244
Genetics Home Reference (NIH)TMEM244
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM244  -     chr6:129831244-129861271 -  6q22.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM244  -     6q22.33   [Description]    (hg19-Feb_2009)
EnsemblTMEM244 - 6q22.33 [CytoView hg19]  TMEM244 - 6q22.33 [CytoView hg38]
Mapping of homologs : NCBITMEM244 [Mapview hg19]  TMEM244 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001010876
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM244
Cluster EST : UnigeneHs.448372 [ NCBI ]
CGAP (NCI)Hs.448372
Alternative Splicing GalleryENSG00000203756
Gene ExpressionTMEM244 [ NCBI-GEO ]   TMEM244 [ EBI - ARRAY_EXPRESS ]   TMEM244 [ SEEK ]   TMEM244 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM244 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)253582
GTEX Portal (Tissue expression)TMEM244
Human Protein AtlasENSG00000203756-TMEM244 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VVB8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VVB8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VVB8
Splice isoforms : SwissVarQ5VVB8
PhosPhoSitePlusQ5VVB8
Domains : Interpro (EBI)Integral_membrane_SYS1-rel   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM244
DMDM Disease mutations253582
Blocks (Seattle)TMEM244
SuperfamilyQ5VVB8
Human Protein Atlas [tissue]ENSG00000203756-TMEM244 [tissue]
Peptide AtlasQ5VVB8
HPRD16663
IPIIPI00161485   
Protein Interaction databases
DIP (DOE-UCLA)Q5VVB8
IntAct (EBI)Q5VVB8
FunCoupENSG00000203756
BioGRIDTMEM244
STRING (EMBL)TMEM244
ZODIACTMEM244
Ontologies - Pathways
QuickGOQ5VVB8
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM244
Atlas of Cancer Signalling NetworkTMEM244
Wikipedia pathwaysTMEM244
Orthology - Evolution
OrthoDB253582
GeneTree (enSembl)ENSG00000203756
Phylogenetic Trees/Animal Genes : TreeFamTMEM244
HOVERGENQ5VVB8
HOGENOMQ5VVB8
Homologs : HomoloGeneTMEM244
Homology/Alignments : Family Browser (UCSC)TMEM244
Gene fusions - Rearrangements
Fusion : QuiverTMEM244
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM244 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM244
dbVarTMEM244
ClinVarTMEM244
1000_GenomesTMEM244 
Exome Variant ServerTMEM244
ExAC (Exome Aggregation Consortium)ENSG00000203756
GNOMAD BrowserENSG00000203756
Varsome BrowserTMEM244
Genetic variants : HAPMAP253582
Genomic Variants (DGV)TMEM244 [DGVbeta]
DECIPHERTMEM244 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM244 
Mutations
ICGC Data PortalTMEM244 
TCGA Data PortalTMEM244 
Broad Tumor PortalTMEM244
OASIS PortalTMEM244 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM244
BioMutasearch TMEM244
DgiDB (Drug Gene Interaction Database)TMEM244
DoCM (Curated mutations)TMEM244 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM244 (select a term)
intoGenTMEM244
Cancer3DTMEM244(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM244
MedgenTMEM244
Genetic Testing Registry TMEM244
NextProtQ5VVB8 [Medical]
TSGene253582
GENETestsTMEM244
Target ValidationTMEM244
Huge Navigator TMEM244 [HugePedia]
snp3D : Map Gene to Disease253582
BioCentury BCIQTMEM244
ClinGenTMEM244
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD253582
Chemical/Pharm GKB GenePA134909151
Clinical trialTMEM244
Miscellaneous
canSAR (ICR)TMEM244 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM244
EVEXTMEM244
GoPubMedTMEM244
iHOPTMEM244
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:35:37 CEST 2018

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