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TMEM249 (transmembrane protein 249)

Identity

Alias (NCBI)C8ORFK29
HGNC (Hugo) TMEM249
HGNC Alias symbC8orfK29
LocusID (NCBI) 340393
Atlas_Id 74913
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 144353226 and ends at 144355609 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM249   44155
Cards
Entrez_Gene (NCBI)TMEM249    transmembrane protein 249
AliasesC8ORFK29
GeneCards (Weizmann)TMEM249
Ensembl hg19 (Hinxton)ENSG00000261587 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261587 [Gene_View]  ENSG00000261587 [Sequence]  chr8:144353226-144355609 [Contig_View]  TMEM249 [Vega]
ICGC DataPortalENSG00000261587
TCGA cBioPortalTMEM249
AceView (NCBI)TMEM249
Genatlas (Paris)TMEM249
SOURCE (Princeton)TMEM249
Genetics Home Reference (NIH)TMEM249
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM249  -     chr8:144353226-144355609 -  8q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM249  -     8q24.3   [Description]    (hg19-Feb_2009)
GoldenPathTMEM249 - 8q24.3 [CytoView hg19]  TMEM249 - 8q24.3 [CytoView hg38]
ImmunoBaseENSG00000261587
Genome Data Viewer NCBITMEM249 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA781425 AB196634 AI478864 BC127763 BC127764
RefSeq transcript (Entrez)NM_001252402 NM_001252404 NM_001280561
Consensus coding sequences : CCDS (NCBI)TMEM249
Gene ExpressionTMEM249 [ NCBI-GEO ]   TMEM249 [ EBI - ARRAY_EXPRESS ]   TMEM249 [ SEEK ]   TMEM249 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM249 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM249 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340393
GTEX Portal (Tissue expression)TMEM249
Human Protein AtlasENSG00000261587-TMEM249 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2WGJ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2WGJ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2WGJ8
PhosPhoSitePlusQ2WGJ8
Domains : Interpro (EBI)DUF4579   
Domain families : Pfam (Sanger)DUF4579 (PF15158)   
Domain families : Pfam (NCBI)pfam15158   
Conserved Domain (NCBI)TMEM249
SuperfamilyQ2WGJ8
AlphaFold pdb e-kbQ2WGJ8   
Human Protein Atlas [tissue]ENSG00000261587-TMEM249 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q2WGJ8
IntAct (EBI)Q2WGJ8
BioGRIDTMEM249
STRING (EMBL)TMEM249
ZODIACTMEM249
Ontologies - Pathways
QuickGOQ2WGJ8
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM249
Atlas of Cancer Signalling NetworkTMEM249
Wikipedia pathwaysTMEM249
Orthology - Evolution
OrthoDB340393
GeneTree (enSembl)ENSG00000261587
Phylogenetic Trees/Animal Genes : TreeFamTMEM249
Homologs : HomoloGeneTMEM249
Homology/Alignments : Family Browser (UCSC)TMEM249
Gene fusions - Rearrangements
Fusion : QuiverTMEM249
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM249 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM249
dbVarTMEM249
ClinVarTMEM249
MonarchTMEM249
1000_GenomesTMEM249 
Exome Variant ServerTMEM249
GNOMAD BrowserENSG00000261587
Varsome BrowserTMEM249
ACMGTMEM249 variants
VarityQ2WGJ8
Genomic Variants (DGV)TMEM249 [DGVbeta]
DECIPHERTMEM249 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM249 
Mutations
ICGC Data PortalTMEM249 
TCGA Data PortalTMEM249 
Broad Tumor PortalTMEM249
OASIS PortalTMEM249 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM249  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM249
Mutations and Diseases : HGMDTMEM249
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM249
DgiDB (Drug Gene Interaction Database)TMEM249
DoCM (Curated mutations)TMEM249
CIViC (Clinical Interpretations of Variants in Cancer)TMEM249
Cancer3DTMEM249
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM249
MedgenTMEM249
Genetic Testing Registry TMEM249
NextProtQ2WGJ8 [Medical]
GENETestsTMEM249
Target ValidationTMEM249
Huge Navigator TMEM249 [HugePedia]
ClinGenTMEM249
Clinical trials, drugs, therapy
MyCancerGenomeTMEM249
Protein Interactions : CTDTMEM249
Pharm GKB GenePA166049108
PharosQ2WGJ8
Clinical trialTMEM249
Miscellaneous
canSAR (ICR)TMEM249
HarmonizomeTMEM249
DataMed IndexTMEM249
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM249
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:26:07 CEST 2021

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