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TMEM25 (transmembrane protein 25)

Identity

Alias_symbol (synonym)FLJ14399
Other alias-
HGNC (Hugo) TMEM25
LocusID (NCBI) 84866
Atlas_Id 51234
Location 11q23.3  [Link to chromosome band 11q23]
Location_base_pair Starts at 118531088 and ends at 118535835 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM25 (11q23.3) / CDH26 (20q13.33)TMEM25 (11q23.3) / TECTA (11q23.3)WDR74 (11q12.3) / TMEM25 (11q23.3)
TMEM25 11q23.3 / CDH26 20q13.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]

Solid Tumors TT_t1120q23q13ID101070


External links

Nomenclature
HGNC (Hugo)TMEM25   25890
Cards
Entrez_Gene (NCBI)TMEM25  84866  transmembrane protein 25
Aliases
GeneCards (Weizmann)TMEM25
Ensembl hg19 (Hinxton)ENSG00000149582 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149582 [Gene_View]  ENSG00000149582 [Sequence]  chr11:118531088-118535835 [Contig_View]  TMEM25 [Vega]
ICGC DataPortalENSG00000149582
TCGA cBioPortalTMEM25
AceView (NCBI)TMEM25
Genatlas (Paris)TMEM25
WikiGenes84866
SOURCE (Princeton)TMEM25
Genetics Home Reference (NIH)TMEM25
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM25  -     chr11:118531088-118535835 +  11q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM25  -     11q23.3   [Description]    (hg19-Feb_2009)
GoldenPathTMEM25 - 11q23.3 [CytoView hg19]  TMEM25 - 11q23.3 [CytoView hg38]
ImmunoBaseENSG00000149582
Mapping of homologs : NCBITMEM25 [Mapview hg19]  TMEM25 [Mapview hg38]
OMIM613934   
Gene and transcription
Genbank (Entrez)AK027305 AK056325 AK075437 AK096260 AK124814
RefSeq transcript (Entrez)NM_001144034 NM_001144035 NM_001144036 NM_001144037 NM_001144038 NM_001318755 NM_001318757 NM_032780
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM25
Alternative Splicing GalleryENSG00000149582
Gene ExpressionTMEM25 [ NCBI-GEO ]   TMEM25 [ EBI - ARRAY_EXPRESS ]   TMEM25 [ SEEK ]   TMEM25 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM25 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)84866
GTEX Portal (Tissue expression)TMEM25
Human Protein AtlasENSG00000149582-TMEM25 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM25
DMDM Disease mutations84866
Blocks (Seattle)TMEM25
Human Protein Atlas [tissue]ENSG00000149582-TMEM25 [tissue]
HPRD11635
IPIIPI00162329   IPI00419599   IPI00043469   IPI00478247   IPI00922575   IPI00921110   IPI00984433   IPI00981099   IPI00981063   IPI00983081   IPI00983695   IPI00985005   IPI00981761   IPI00977589   IPI00976935   IPI00982766   
Protein Interaction databases
FunCoupENSG00000149582
BioGRIDTMEM25
STRING (EMBL)TMEM25
ZODIACTMEM25
Ontologies - Pathways
Huge Navigator TMEM25 [HugePedia]
snp3D : Map Gene to Disease84866
BioCentury BCIQTMEM25
ClinGenTMEM25
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84866
Chemical/Pharm GKB GenePA134919013
Clinical trialTMEM25
Miscellaneous
canSAR (ICR)TMEM25 (select the gene name)
DataMed IndexTMEM25
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM25
EVEXTMEM25
GoPubMedTMEM25
iHOPTMEM25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 19 17:13:24 CET 2020

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