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TMEM251 (transmembrane protein 251)

Identity

Alias_namesC14orf109
chromosome 14 open reading frame 109
Alias_symbol (synonym)DKFZP564F1123
Other alias
HGNC (Hugo) TMEM251
LocusID (NCBI) 26175
Atlas_Id 74914
Location 14q32.12  [Link to chromosome band 14q32]
Location_base_pair Starts at 93185030 and ends at 93187080 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TMEM251 (14q32.12) / UBR7 (14q32.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM251   20218
Cards
Entrez_Gene (NCBI)TMEM251  26175  transmembrane protein 251
AliasesC14orf109
GeneCards (Weizmann)TMEM251
Ensembl hg19 (Hinxton)ENSG00000153485 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000153485 [Gene_View]  chr14:93185030-93187080 [Contig_View]  TMEM251 [Vega]
ICGC DataPortalENSG00000153485
TCGA cBioPortalTMEM251
AceView (NCBI)TMEM251
Genatlas (Paris)TMEM251
WikiGenes26175
SOURCE (Princeton)TMEM251
Genetics Home Reference (NIH)TMEM251
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM251  -     chr14:93185030-93187080 +  14q32.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM251  -     14q32.12   [Description]    (hg19-Feb_2009)
EnsemblTMEM251 - 14q32.12 [CytoView hg19]  TMEM251 - 14q32.12 [CytoView hg38]
Mapping of homologs : NCBITMEM251 [Mapview hg19]  TMEM251 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL080118 AW404266 BC030119 BP398505 CX785861
RefSeq transcript (Entrez)NM_001098621 NM_015676
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_187601
Consensus coding sequences : CCDS (NCBI)TMEM251
Cluster EST : UnigeneHs.648806 [ NCBI ]
CGAP (NCI)Hs.648806
Alternative Splicing GalleryENSG00000153485
Gene ExpressionTMEM251 [ NCBI-GEO ]   TMEM251 [ EBI - ARRAY_EXPRESS ]   TMEM251 [ SEEK ]   TMEM251 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM251 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26175
GTEX Portal (Tissue expression)TMEM251
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N6I4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N6I4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N6I4
Splice isoforms : SwissVarQ8N6I4
PhosPhoSitePlusQ8N6I4
Domains : Interpro (EBI)TMEM251   
Domain families : Pfam (Sanger)TMEM251 (PF15190)   
Domain families : Pfam (NCBI)pfam15190   
Domain structure : Prodom (Prabi Lyon)PD641273 (PD641273)   
Conserved Domain (NCBI)TMEM251
DMDM Disease mutations26175
Blocks (Seattle)TMEM251
SuperfamilyQ8N6I4
Human Protein AtlasENSG00000153485
Peptide AtlasQ8N6I4
IPIIPI00848053   IPI00401760   
Protein Interaction databases
DIP (DOE-UCLA)Q8N6I4
IntAct (EBI)Q8N6I4
FunCoupENSG00000153485
BioGRIDTMEM251
STRING (EMBL)TMEM251
ZODIACTMEM251
Ontologies - Pathways
QuickGOQ8N6I4
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM251
Atlas of Cancer Signalling NetworkTMEM251
Wikipedia pathwaysTMEM251
Orthology - Evolution
OrthoDB26175
GeneTree (enSembl)ENSG00000153485
Phylogenetic Trees/Animal Genes : TreeFamTMEM251
HOVERGENQ8N6I4
HOGENOMQ8N6I4
Homologs : HomoloGeneTMEM251
Homology/Alignments : Family Browser (UCSC)TMEM251
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM251 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM251
dbVarTMEM251
ClinVarTMEM251
1000_GenomesTMEM251 
Exome Variant ServerTMEM251
ExAC (Exome Aggregation Consortium)TMEM251 (select the gene name)
Genetic variants : HAPMAP26175
Genomic Variants (DGV)TMEM251 [DGVbeta]
DECIPHERTMEM251 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM251 
Mutations
ICGC Data PortalTMEM251 
TCGA Data PortalTMEM251 
Broad Tumor PortalTMEM251
OASIS PortalTMEM251 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM251
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM251
DgiDB (Drug Gene Interaction Database)TMEM251
DoCM (Curated mutations)TMEM251 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM251 (select a term)
intoGenTMEM251
Cancer3DTMEM251(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM251
Genetic Testing Registry TMEM251
NextProtQ8N6I4 [Medical]
TSGene26175
GENETestsTMEM251
Target ValidationTMEM251
Huge Navigator TMEM251 [HugePedia]
snp3D : Map Gene to Disease26175
BioCentury BCIQTMEM251
ClinGenTMEM251
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26175
Chemical/Pharm GKB GenePA134977710
Clinical trialTMEM251
Miscellaneous
canSAR (ICR)TMEM251 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM251
EVEXTMEM251
GoPubMedTMEM251
iHOPTMEM251
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:46:14 CEST 2017

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