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TMEM254-AS1 (TMEM254 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM254-AS1
LocusID (NCBI) 219347
Atlas_Id 74918
Location 10q22.3  [Link to chromosome band 10q22]
Location_base_pair Starts at 80046233 and ends at 80079193 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)TMEM254-AS1   27340
Cards
Entrez_Gene (NCBI)TMEM254-AS1    TMEM254 antisense RNA 1
Aliases
GeneCards (Weizmann)TMEM254-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:80046233-80079193 [Contig_View]  TMEM254-AS1 [Vega]
TCGA cBioPortalTMEM254-AS1
AceView (NCBI)TMEM254-AS1
Genatlas (Paris)TMEM254-AS1
SOURCE (Princeton)TMEM254-AS1
Genetics Home Reference (NIH)TMEM254-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM254-AS1  -     chr10:80046233-80079193 -  10q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM254-AS1  -     10q22.3   [Description]    (hg19-Feb_2009)
GoldenPathTMEM254-AS1 - 10q22.3 [CytoView hg19]  TMEM254-AS1 - 10q22.3 [CytoView hg38]
Genome Data Viewer NCBITMEM254-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK021673 AK096758 AK308811 AK309654 AK310182
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM254-AS1
Gene ExpressionTMEM254-AS1 [ NCBI-GEO ]   TMEM254-AS1 [ EBI - ARRAY_EXPRESS ]   TMEM254-AS1 [ SEEK ]   TMEM254-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM254-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM254-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219347
GTEX Portal (Tissue expression)TMEM254-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM254-AS1
Protein Interaction databases
BioGRIDTMEM254-AS1
STRING (EMBL)TMEM254-AS1
ZODIACTMEM254-AS1
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM254-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:08 CEST 2021
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