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TMEM255A (transmembrane protein 255A)

Identity

Alias_namesFAM70A
family with sequence similarity 70, member A
Alias_symbol (synonym)FLJ20716
Other alias
HGNC (Hugo) TMEM255A
LocusID (NCBI) 55026
Atlas_Id 74919
Location Xq24  [Link to chromosome band Xq24]
Location_base_pair Starts at 120258650 and ends at 120311536 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM255A   26086
Cards
Entrez_Gene (NCBI)TMEM255A  55026  transmembrane protein 255A
AliasesFAM70A
GeneCards (Weizmann)TMEM255A
Ensembl hg19 (Hinxton)ENSG00000125355 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000125355 [Gene_View]  chrX:120258650-120311536 [Contig_View]  TMEM255A [Vega]
ICGC DataPortalENSG00000125355
TCGA cBioPortalTMEM255A
AceView (NCBI)TMEM255A
Genatlas (Paris)TMEM255A
WikiGenes55026
SOURCE (Princeton)TMEM255A
Genetics Home Reference (NIH)TMEM255A
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM255A  -     chrX:120258650-120311536 -  Xq24   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM255A  -     Xq24   [Description]    (hg19-Feb_2009)
EnsemblTMEM255A - Xq24 [CytoView hg19]  TMEM255A - Xq24 [CytoView hg38]
Mapping of homologs : NCBITMEM255A [Mapview hg19]  TMEM255A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF450484 AK000723 AK056403 AK289684 BC047054
RefSeq transcript (Entrez)NM_001104544 NM_001104545 NM_017938
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM255A
Cluster EST : UnigeneHs.437563 [ NCBI ]
CGAP (NCI)Hs.437563
Alternative Splicing GalleryENSG00000125355
Gene ExpressionTMEM255A [ NCBI-GEO ]   TMEM255A [ EBI - ARRAY_EXPRESS ]   TMEM255A [ SEEK ]   TMEM255A [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM255A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55026
GTEX Portal (Tissue expression)TMEM255A
Human Protein AtlasENSG00000125355-TMEM255A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JRV8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JRV8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JRV8
Splice isoforms : SwissVarQ5JRV8
PhosPhoSitePlusQ5JRV8
Domains : Interpro (EBI)FAM70   
Domain families : Pfam (Sanger)FAM70 (PF14967)   
Domain families : Pfam (NCBI)pfam14967   
Conserved Domain (NCBI)TMEM255A
DMDM Disease mutations55026
Blocks (Seattle)TMEM255A
SuperfamilyQ5JRV8
Human Protein Atlas [tissue]ENSG00000125355-TMEM255A [tissue]
Peptide AtlasQ5JRV8
HPRD06535
IPIIPI00295716   IPI00640100   IPI00867622   IPI00552411   
Protein Interaction databases
DIP (DOE-UCLA)Q5JRV8
IntAct (EBI)Q5JRV8
FunCoupENSG00000125355
BioGRIDTMEM255A
STRING (EMBL)TMEM255A
ZODIACTMEM255A
Ontologies - Pathways
QuickGOQ5JRV8
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM255A
Atlas of Cancer Signalling NetworkTMEM255A
Wikipedia pathwaysTMEM255A
Orthology - Evolution
OrthoDB55026
GeneTree (enSembl)ENSG00000125355
Phylogenetic Trees/Animal Genes : TreeFamTMEM255A
HOVERGENQ5JRV8
HOGENOMQ5JRV8
Homologs : HomoloGeneTMEM255A
Homology/Alignments : Family Browser (UCSC)TMEM255A
Gene fusions - Rearrangements
Tumor Fusion PortalTMEM255A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM255A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM255A
dbVarTMEM255A
ClinVarTMEM255A
1000_GenomesTMEM255A 
Exome Variant ServerTMEM255A
ExAC (Exome Aggregation Consortium)ENSG00000125355
GNOMAD BrowserENSG00000125355
Genetic variants : HAPMAP55026
Genomic Variants (DGV)TMEM255A [DGVbeta]
DECIPHERTMEM255A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM255A 
Mutations
ICGC Data PortalTMEM255A 
TCGA Data PortalTMEM255A 
Broad Tumor PortalTMEM255A
OASIS PortalTMEM255A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM255A
BioMutasearch TMEM255A
DgiDB (Drug Gene Interaction Database)TMEM255A
DoCM (Curated mutations)TMEM255A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM255A (select a term)
intoGenTMEM255A
Cancer3DTMEM255A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM255A
MedgenTMEM255A
Genetic Testing Registry TMEM255A
NextProtQ5JRV8 [Medical]
TSGene55026
GENETestsTMEM255A
Target ValidationTMEM255A
Huge Navigator TMEM255A [HugePedia]
snp3D : Map Gene to Disease55026
BioCentury BCIQTMEM255A
ClinGenTMEM255A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55026
Chemical/Pharm GKB GenePA142671885
Clinical trialTMEM255A
Miscellaneous
canSAR (ICR)TMEM255A (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM255A
EVEXTMEM255A
GoPubMedTMEM255A
iHOPTMEM255A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 14:00:48 CET 2017

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