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TMEM255B (transmembrane protein 255B)

Identity

Alias_namesFAM70B
family with sequence similarity 70, member B
Alias_symbol (synonym)MGC20579
Other alias
HGNC (Hugo) TMEM255B
LocusID (NCBI) 348013
Atlas_Id 74920
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 113759243 and ends at 113812243 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TCF12 (15q21.3) / TMEM255B (13q34)TFDP1 (13q34) / TMEM255B (13q34)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM255B   28297
Cards
Entrez_Gene (NCBI)TMEM255B  348013  transmembrane protein 255B
AliasesFAM70B
GeneCards (Weizmann)TMEM255B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:113759243-113812243 [Contig_View]  TMEM255B [Vega]
TCGA cBioPortalTMEM255B
AceView (NCBI)TMEM255B
Genatlas (Paris)TMEM255B
WikiGenes348013
SOURCE (Princeton)TMEM255B
Genetics Home Reference (NIH)TMEM255B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM255B  -     chr13:113759243-113812243 +  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM255B  -     13q34   [Description]    (hg19-Feb_2009)
EnsemblTMEM255B - 13q34 [CytoView hg19]  TMEM255B - 13q34 [CytoView hg38]
Mapping of homologs : NCBITMEM255B [Mapview hg19]  TMEM255B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK295653 BC018995 EU831453 EU831540
RefSeq transcript (Entrez)NM_001348663 NM_182614
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM255B
Cluster EST : UnigeneHs.280805 [ NCBI ]
CGAP (NCI)Hs.280805
Gene ExpressionTMEM255B [ NCBI-GEO ]   TMEM255B [ EBI - ARRAY_EXPRESS ]   TMEM255B [ SEEK ]   TMEM255B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM255B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)348013
GTEX Portal (Tissue expression)TMEM255B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WV15   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WV15  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WV15
Splice isoforms : SwissVarQ8WV15
PhosPhoSitePlusQ8WV15
Domains : Interpro (EBI)FAM70   
Domain families : Pfam (Sanger)FAM70 (PF14967)   
Domain families : Pfam (NCBI)pfam14967   
Conserved Domain (NCBI)TMEM255B
DMDM Disease mutations348013
Blocks (Seattle)TMEM255B
SuperfamilyQ8WV15
Peptide AtlasQ8WV15
HPRD14474
IPIIPI00102988   IPI00910388   IPI00479639   
Protein Interaction databases
DIP (DOE-UCLA)Q8WV15
IntAct (EBI)Q8WV15
BioGRIDTMEM255B
STRING (EMBL)TMEM255B
ZODIACTMEM255B
Ontologies - Pathways
QuickGOQ8WV15
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM255B
Atlas of Cancer Signalling NetworkTMEM255B
Wikipedia pathwaysTMEM255B
Orthology - Evolution
OrthoDB348013
Phylogenetic Trees/Animal Genes : TreeFamTMEM255B
HOVERGENQ8WV15
HOGENOMQ8WV15
Homologs : HomoloGeneTMEM255B
Homology/Alignments : Family Browser (UCSC)TMEM255B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM255B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM255B
dbVarTMEM255B
ClinVarTMEM255B
1000_GenomesTMEM255B 
Exome Variant ServerTMEM255B
ExAC (Exome Aggregation Consortium)TMEM255B (select the gene name)
Genetic variants : HAPMAP348013
Genomic Variants (DGV)TMEM255B [DGVbeta]
DECIPHERTMEM255B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM255B 
Mutations
ICGC Data PortalTMEM255B 
TCGA Data PortalTMEM255B 
Broad Tumor PortalTMEM255B
OASIS PortalTMEM255B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM255B
BioMutasearch TMEM255B
DgiDB (Drug Gene Interaction Database)TMEM255B
DoCM (Curated mutations)TMEM255B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM255B (select a term)
intoGenTMEM255B
Cancer3DTMEM255B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM255B
Genetic Testing Registry TMEM255B
NextProtQ8WV15 [Medical]
TSGene348013
GENETestsTMEM255B
Huge Navigator TMEM255B [HugePedia]
snp3D : Map Gene to Disease348013
BioCentury BCIQTMEM255B
ClinGenTMEM255B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD348013
Chemical/Pharm GKB GenePA142671886
Clinical trialTMEM255B
Miscellaneous
canSAR (ICR)TMEM255B (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM255B
EVEXTMEM255B
GoPubMedTMEM255B
iHOPTMEM255B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:58:46 CEST 2017

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