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TMEM255B (transmembrane protein 255B)

Identity

Alias (NCBI)FAM70B
HGNC (Hugo) TMEM255B
HGNC Alias symbMGC20579
HGNC Previous nameFAM70B
HGNC Previous namefamily with sequence similarity 70, member B
LocusID (NCBI) 348013
Atlas_Id 74920
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 113759226 and ends at 113816995 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TCF12 (15q21.3) / TMEM255B (13q34)TFDP1 (13q34) / TMEM255B (13q34)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM255B   28297
Cards
Entrez_Gene (NCBI)TMEM255B    transmembrane protein 255B
AliasesFAM70B
GeneCards (Weizmann)TMEM255B
Ensembl hg19 (Hinxton)ENSG00000184497 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184497 [Gene_View]  ENSG00000184497 [Sequence]  chr13:113759226-113816995 [Contig_View]  TMEM255B [Vega]
ICGC DataPortalENSG00000184497
TCGA cBioPortalTMEM255B
AceView (NCBI)TMEM255B
Genatlas (Paris)TMEM255B
SOURCE (Princeton)TMEM255B
Genetics Home Reference (NIH)TMEM255B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM255B  -     chr13:113759226-113816995 +  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM255B  -     13q34   [Description]    (hg19-Feb_2009)
GoldenPathTMEM255B - 13q34 [CytoView hg19]  TMEM255B - 13q34 [CytoView hg38]
ImmunoBaseENSG00000184497
Genome Data Viewer NCBITMEM255B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK295653 BC018995
RefSeq transcript (Entrez)NM_001348663 NM_182614
Consensus coding sequences : CCDS (NCBI)TMEM255B
Gene ExpressionTMEM255B [ NCBI-GEO ]   TMEM255B [ EBI - ARRAY_EXPRESS ]   TMEM255B [ SEEK ]   TMEM255B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM255B [ Firebrowse - Broad ]
GenevisibleExpression of TMEM255B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)348013
GTEX Portal (Tissue expression)TMEM255B
Human Protein AtlasENSG00000184497-TMEM255B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WV15   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WV15  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WV15
PhosPhoSitePlusQ8WV15
Domains : Interpro (EBI)TMEM255   
Domain families : Pfam (Sanger)FAM70 (PF14967)   
Domain families : Pfam (NCBI)pfam14967   
Conserved Domain (NCBI)TMEM255B
SuperfamilyQ8WV15
AlphaFold pdb e-kbQ8WV15   
Human Protein Atlas [tissue]ENSG00000184497-TMEM255B [tissue]
HPRD14474
Protein Interaction databases
DIP (DOE-UCLA)Q8WV15
IntAct (EBI)Q8WV15
BioGRIDTMEM255B
STRING (EMBL)TMEM255B
ZODIACTMEM255B
Ontologies - Pathways
QuickGOQ8WV15
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkTMEM255B
Atlas of Cancer Signalling NetworkTMEM255B
Wikipedia pathwaysTMEM255B
Orthology - Evolution
OrthoDB348013
GeneTree (enSembl)ENSG00000184497
Phylogenetic Trees/Animal Genes : TreeFamTMEM255B
Homologs : HomoloGeneTMEM255B
Homology/Alignments : Family Browser (UCSC)TMEM255B
Gene fusions - Rearrangements
Fusion : QuiverTMEM255B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM255B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM255B
dbVarTMEM255B
ClinVarTMEM255B
MonarchTMEM255B
1000_GenomesTMEM255B 
Exome Variant ServerTMEM255B
GNOMAD BrowserENSG00000184497
Varsome BrowserTMEM255B
ACMGTMEM255B variants
VarityQ8WV15
Genomic Variants (DGV)TMEM255B [DGVbeta]
DECIPHERTMEM255B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM255B 
Mutations
ICGC Data PortalTMEM255B 
TCGA Data PortalTMEM255B 
Broad Tumor PortalTMEM255B
OASIS PortalTMEM255B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM255B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM255B
Mutations and Diseases : HGMDTMEM255B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM255B
DgiDB (Drug Gene Interaction Database)TMEM255B
DoCM (Curated mutations)TMEM255B
CIViC (Clinical Interpretations of Variants in Cancer)TMEM255B
Cancer3DTMEM255B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM255B
MedgenTMEM255B
Genetic Testing Registry TMEM255B
NextProtQ8WV15 [Medical]
GENETestsTMEM255B
Target ValidationTMEM255B
Huge Navigator TMEM255B [HugePedia]
ClinGenTMEM255B
Clinical trials, drugs, therapy
MyCancerGenomeTMEM255B
Protein Interactions : CTDTMEM255B
Pharm GKB GenePA142671886
PharosQ8WV15
Clinical trialTMEM255B
Miscellaneous
canSAR (ICR)TMEM255B
HarmonizomeTMEM255B
DataMed IndexTMEM255B
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM255B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:26:09 CEST 2021

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