Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TMEM256-PLSCR3 (TMEM256-PLSCR3 readthrough (NMD candidate))

Identity

Other aliasC17orf61-PLSCR3
HGNC (Hugo) TMEM256-PLSCR3
LocusID (NCBI) 100529211
Atlas_Id 74922
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7389728 and ends at 7404131 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM256-PLSCR3   49186
Cards
Entrez_Gene (NCBI)TMEM256-PLSCR3  100529211  TMEM256-PLSCR3 readthrough (NMD candidate)
AliasesC17orf61-PLSCR3
GeneCards (Weizmann)TMEM256-PLSCR3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:7389728-7404131 [Contig_View]  TMEM256-PLSCR3 [Vega]
TCGA cBioPortalTMEM256-PLSCR3
AceView (NCBI)TMEM256-PLSCR3
Genatlas (Paris)TMEM256-PLSCR3
WikiGenes100529211
SOURCE (Princeton)TMEM256-PLSCR3
Genetics Home Reference (NIH)TMEM256-PLSCR3
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM256-PLSCR3  -     chr17:7389728-7404131 -  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM256-PLSCR3  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM256-PLSCR3 - 17p13.1 [CytoView hg19]  TMEM256-PLSCR3 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBITMEM256-PLSCR3 [Mapview hg19]  TMEM256-PLSCR3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055822 AK290117
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM256-PLSCR3
Cluster EST : UnigeneHs.534591 [ NCBI ]
CGAP (NCI)Hs.534591
Gene ExpressionTMEM256-PLSCR3 [ NCBI-GEO ]   TMEM256-PLSCR3 [ EBI - ARRAY_EXPRESS ]   TMEM256-PLSCR3 [ SEEK ]   TMEM256-PLSCR3 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM256-PLSCR3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100529211
GTEX Portal (Tissue expression)TMEM256-PLSCR3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM256-PLSCR3
DMDM Disease mutations100529211
Blocks (Seattle)TMEM256-PLSCR3
Protein Interaction databases
BioGRIDTMEM256-PLSCR3
STRING (EMBL)TMEM256-PLSCR3
ZODIACTMEM256-PLSCR3
Ontologies - Pathways
Huge Navigator TMEM256-PLSCR3 [HugePedia]
snp3D : Map Gene to Disease100529211
BioCentury BCIQTMEM256-PLSCR3
ClinGenTMEM256-PLSCR3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100529211
Clinical trialTMEM256-PLSCR3
Miscellaneous
canSAR (ICR)TMEM256-PLSCR3 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM256-PLSCR3
EVEXTMEM256-PLSCR3
GoPubMedTMEM256-PLSCR3
iHOPTMEM256-PLSCR3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:37:08 CET 2017

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