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TMEM256 (transmembrane protein 256)

Identity

Alias (NCBI)C17orf61
HGNC (Hugo) TMEM256
HGNC Alias symbMGC40107
HGNC Previous nameC17orf61
HGNC Previous namechromosome 17 open reading frame 61
LocusID (NCBI) 254863
Atlas_Id 57030
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7402976 and ends at 7404097 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TNK1 (17p13.1) / TMEM256 (17p13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM256   28618
Cards
Entrez_Gene (NCBI)TMEM256    transmembrane protein 256
AliasesC17orf61
GeneCards (Weizmann)TMEM256
Ensembl hg19 (Hinxton)ENSG00000205544 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205544 [Gene_View]  ENSG00000205544 [Sequence]  chr17:7402976-7404097 [Contig_View]  TMEM256 [Vega]
ICGC DataPortalENSG00000205544
TCGA cBioPortalTMEM256
AceView (NCBI)TMEM256
Genatlas (Paris)TMEM256
SOURCE (Princeton)TMEM256
Genetics Home Reference (NIH)TMEM256
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM256  -     chr17:7402976-7404097 -  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM256  -     17p13.1   [Description]    (hg19-Feb_2009)
GoldenPathTMEM256 - 17p13.1 [CytoView hg19]  TMEM256 - 17p13.1 [CytoView hg38]
ImmunoBaseENSG00000205544
Genome Data Viewer NCBITMEM256 [Mapview hg19]  
OMIM617779   
Gene and transcription
Genbank (Entrez)BC030270 BM749297 CB140450 EB386328
RefSeq transcript (Entrez)NM_152766
Consensus coding sequences : CCDS (NCBI)TMEM256
Gene ExpressionTMEM256 [ NCBI-GEO ]   TMEM256 [ EBI - ARRAY_EXPRESS ]   TMEM256 [ SEEK ]   TMEM256 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM256 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM256 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254863
GTEX Portal (Tissue expression)TMEM256
Human Protein AtlasENSG00000205544-TMEM256 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N2U0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N2U0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N2U0
PhosPhoSitePlusQ8N2U0
Domains : Interpro (EBI)DUF423   
Domain families : Pfam (Sanger)DUF423 (PF04241)   
Domain families : Pfam (NCBI)pfam04241   
Conserved Domain (NCBI)TMEM256
SuperfamilyQ8N2U0
AlphaFold pdb e-kbQ8N2U0   
Human Protein Atlas [tissue]ENSG00000205544-TMEM256 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8N2U0
IntAct (EBI)Q8N2U0
BioGRIDTMEM256
STRING (EMBL)TMEM256
ZODIACTMEM256
Ontologies - Pathways
QuickGOQ8N2U0
Ontology : AmiGOmolecular_function  biological_process  integral component of membrane  extracellular exosome  
Ontology : EGO-EBImolecular_function  biological_process  integral component of membrane  extracellular exosome  
NDEx NetworkTMEM256
Atlas of Cancer Signalling NetworkTMEM256
Wikipedia pathwaysTMEM256
Orthology - Evolution
OrthoDB254863
GeneTree (enSembl)ENSG00000205544
Phylogenetic Trees/Animal Genes : TreeFamTMEM256
Homologs : HomoloGeneTMEM256
Homology/Alignments : Family Browser (UCSC)TMEM256
Gene fusions - Rearrangements
Fusion : QuiverTMEM256
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM256 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM256
dbVarTMEM256
ClinVarTMEM256
MonarchTMEM256
1000_GenomesTMEM256 
Exome Variant ServerTMEM256
GNOMAD BrowserENSG00000205544
Varsome BrowserTMEM256
ACMGTMEM256 variants
VarityQ8N2U0
Genomic Variants (DGV)TMEM256 [DGVbeta]
DECIPHERTMEM256 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM256 
Mutations
ICGC Data PortalTMEM256 
TCGA Data PortalTMEM256 
Broad Tumor PortalTMEM256
OASIS PortalTMEM256 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM256  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM256
Mutations and Diseases : HGMDTMEM256
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM256
DgiDB (Drug Gene Interaction Database)TMEM256
DoCM (Curated mutations)TMEM256
CIViC (Clinical Interpretations of Variants in Cancer)TMEM256
Cancer3DTMEM256
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617779   
Orphanet
DisGeNETTMEM256
MedgenTMEM256
Genetic Testing Registry TMEM256
NextProtQ8N2U0 [Medical]
GENETestsTMEM256
Target ValidationTMEM256
Huge Navigator TMEM256 [HugePedia]
ClinGenTMEM256
Clinical trials, drugs, therapy
MyCancerGenomeTMEM256
Protein Interactions : CTDTMEM256
Pharm GKB GenePA142672244
PharosQ8N2U0
Clinical trialTMEM256
Miscellaneous
canSAR (ICR)TMEM256
HarmonizomeTMEM256
DataMed IndexTMEM256
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM256
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:35:30 CEST 2021

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