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TMEM256 (transmembrane protein 256)

Identity

Other aliasC17orf61
HGNC (Hugo) TMEM256
LocusID (NCBI) 254863
Atlas_Id 57030
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7402974 and ends at 7404131 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TNK1 (17p13.1) / TMEM256 (17p13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM256   28618
Cards
Entrez_Gene (NCBI)TMEM256  254863  transmembrane protein 256
AliasesC17orf61
GeneCards (Weizmann)TMEM256
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:7402974-7404131 [Contig_View]  TMEM256 [Vega]
TCGA cBioPortalTMEM256
AceView (NCBI)TMEM256
Genatlas (Paris)TMEM256
WikiGenes254863
SOURCE (Princeton)TMEM256
Genetics Home Reference (NIH)TMEM256
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM256  -     chr17:7402974-7404131 -  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM256  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM256 - 17p13.1 [CytoView hg19]  TMEM256 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBITMEM256 [Mapview hg19]  TMEM256 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC030270 BM749297 CB140450 EB386328
RefSeq transcript (Entrez)NM_152766
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM256
Cluster EST : UnigeneHs.730789 [ NCBI ]
CGAP (NCI)Hs.730789
Gene ExpressionTMEM256 [ NCBI-GEO ]   TMEM256 [ EBI - ARRAY_EXPRESS ]   TMEM256 [ SEEK ]   TMEM256 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM256 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254863
GTEX Portal (Tissue expression)TMEM256
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N2U0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N2U0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N2U0
Splice isoforms : SwissVarQ8N2U0
PhosPhoSitePlusQ8N2U0
Domains : Interpro (EBI)DUF423   
Domain families : Pfam (Sanger)DUF423 (PF04241)   
Domain families : Pfam (NCBI)pfam04241   
Conserved Domain (NCBI)TMEM256
DMDM Disease mutations254863
Blocks (Seattle)TMEM256
SuperfamilyQ8N2U0
Peptide AtlasQ8N2U0
IPIIPI00166483   
Protein Interaction databases
DIP (DOE-UCLA)Q8N2U0
IntAct (EBI)Q8N2U0
BioGRIDTMEM256
STRING (EMBL)TMEM256
ZODIACTMEM256
Ontologies - Pathways
QuickGOQ8N2U0
Ontology : AmiGOmolecular_function  biological_process  integral component of membrane  extracellular exosome  
Ontology : EGO-EBImolecular_function  biological_process  integral component of membrane  extracellular exosome  
NDEx NetworkTMEM256
Atlas of Cancer Signalling NetworkTMEM256
Wikipedia pathwaysTMEM256
Orthology - Evolution
OrthoDB254863
Phylogenetic Trees/Animal Genes : TreeFamTMEM256
HOVERGENQ8N2U0
HOGENOMQ8N2U0
Homologs : HomoloGeneTMEM256
Homology/Alignments : Family Browser (UCSC)TMEM256
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM256 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM256
dbVarTMEM256
ClinVarTMEM256
1000_GenomesTMEM256 
Exome Variant ServerTMEM256
ExAC (Exome Aggregation Consortium)TMEM256 (select the gene name)
Genetic variants : HAPMAP254863
Genomic Variants (DGV)TMEM256 [DGVbeta]
DECIPHERTMEM256 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM256 
Mutations
ICGC Data PortalTMEM256 
TCGA Data PortalTMEM256 
Broad Tumor PortalTMEM256
OASIS PortalTMEM256 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM256
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM256
DgiDB (Drug Gene Interaction Database)TMEM256
DoCM (Curated mutations)TMEM256 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM256 (select a term)
intoGenTMEM256
Cancer3DTMEM256(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM256
Genetic Testing Registry TMEM256
NextProtQ8N2U0 [Medical]
TSGene254863
GENETestsTMEM256
Target ValidationTMEM256
Huge Navigator TMEM256 [HugePedia]
snp3D : Map Gene to Disease254863
BioCentury BCIQTMEM256
ClinGenTMEM256
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD254863
Chemical/Pharm GKB GenePA142672244
Clinical trialTMEM256
Miscellaneous
canSAR (ICR)TMEM256 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM256
EVEXTMEM256
GoPubMedTMEM256
iHOPTMEM256
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:35:26 CEST 2017

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