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TMEM26 (transmembrane protein 26)

Identity

Alias_symbol (synonym)MGC35010
Em:AC068892.1
Other alias-
HGNC (Hugo) TMEM26
LocusID (NCBI) 219623
Atlas_Id 74925
Location 10q21.2  [Link to chromosome band 10q21]
Location_base_pair Starts at 63166401 and ends at 63213208 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
EVI5 (1p22.1) / TMEM26 (10q21.2)NEBL (10p12.31) / TMEM26 (10q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM26   28550
Cards
Entrez_Gene (NCBI)TMEM26  219623  transmembrane protein 26
Aliases
GeneCards (Weizmann)TMEM26
Ensembl hg19 (Hinxton)ENSG00000196932 [Gene_View]  chr10:63166401-63213208 [Contig_View]  TMEM26 [Vega]
Ensembl hg38 (Hinxton)ENSG00000196932 [Gene_View]  chr10:63166401-63213208 [Contig_View]  TMEM26 [Vega]
ICGC DataPortalENSG00000196932
TCGA cBioPortalTMEM26
AceView (NCBI)TMEM26
Genatlas (Paris)TMEM26
WikiGenes219623
SOURCE (Princeton)TMEM26
Genetics Home Reference (NIH)TMEM26
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM26  -     chr10:63166401-63213208 -  10q21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM26  -     10q21.2   [Description]    (hg38-Dec_2013)
EnsemblTMEM26 - 10q21.2 [CytoView hg19]  TMEM26 - 10q21.2 [CytoView hg38]
Mapping of homologs : NCBITMEM26 [Mapview hg19]  TMEM26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124367 AK125611 BC042872 CR749606
RefSeq transcript (Entrez)NM_178505
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)TMEM26
Cluster EST : UnigeneHs.623955 [ NCBI ]
CGAP (NCI)Hs.623955
Alternative Splicing GalleryENSG00000196932
Gene ExpressionTMEM26 [ NCBI-GEO ]   TMEM26 [ EBI - ARRAY_EXPRESS ]   TMEM26 [ SEEK ]   TMEM26 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219623
GTEX Portal (Tissue expression)TMEM26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZUK4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZUK4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZUK4
Splice isoforms : SwissVarQ6ZUK4
PhosPhoSitePlusQ6ZUK4
Domains : Interpro (EBI)Transmembrane_26   
Domain families : Pfam (Sanger)Tmem26 (PF09772)   
Domain families : Pfam (NCBI)pfam09772   
Conserved Domain (NCBI)TMEM26
DMDM Disease mutations219623
Blocks (Seattle)TMEM26
SuperfamilyQ6ZUK4
Human Protein AtlasENSG00000196932
Peptide AtlasQ6ZUK4
HPRD15534
IPIIPI00445668   IPI00761089   IPI00967678   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZUK4
IntAct (EBI)Q6ZUK4
FunCoupENSG00000196932
BioGRIDTMEM26
STRING (EMBL)TMEM26
ZODIACTMEM26
Ontologies - Pathways
QuickGOQ6ZUK4
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM26
Atlas of Cancer Signalling NetworkTMEM26
Wikipedia pathwaysTMEM26
Orthology - Evolution
OrthoDB219623
GeneTree (enSembl)ENSG00000196932
Phylogenetic Trees/Animal Genes : TreeFamTMEM26
HOVERGENQ6ZUK4
HOGENOMQ6ZUK4
Homologs : HomoloGeneTMEM26
Homology/Alignments : Family Browser (UCSC)TMEM26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM26
dbVarTMEM26
ClinVarTMEM26
1000_GenomesTMEM26 
Exome Variant ServerTMEM26
ExAC (Exome Aggregation Consortium)TMEM26 (select the gene name)
Genetic variants : HAPMAP219623
Genomic Variants (DGV)TMEM26 [DGVbeta]
DECIPHER (Syndromes)10:63166401-63213208  ENSG00000196932
CONAN: Copy Number AnalysisTMEM26 
Mutations
ICGC Data PortalTMEM26 
TCGA Data PortalTMEM26 
Broad Tumor PortalTMEM26
OASIS PortalTMEM26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM26
DgiDB (Drug Gene Interaction Database)TMEM26
DoCM (Curated mutations)TMEM26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM26 (select a term)
intoGenTMEM26
Cancer3DTMEM26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM26
Genetic Testing Registry TMEM26
NextProtQ6ZUK4 [Medical]
TSGene219623
GENETestsTMEM26
Huge Navigator TMEM26 [HugePedia]
snp3D : Map Gene to Disease219623
BioCentury BCIQTMEM26
ClinGenTMEM26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219623
Chemical/Pharm GKB GenePA134887276
Clinical trialTMEM26
Miscellaneous
canSAR (ICR)TMEM26 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM26
EVEXTMEM26
GoPubMedTMEM26
iHOPTMEM26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:48:52 CET 2017

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