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TMEM261 (transmembrane protein 261)

Identity

Alias_namesC9orf123
chromosome 9 open reading frame 123
Alias_symbol (synonym)MGC4730
Other alias
HGNC (Hugo) TMEM261
LocusID (NCBI) 90871
Atlas_Id 74926
Location 9p24.1  [Link to chromosome band 9p24]
Location_base_pair Starts at 7796491 and ends at 7799799 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM261   30536
Cards
Entrez_Gene (NCBI)TMEM261  90871  transmembrane protein 261
AliasesC9orf123
GeneCards (Weizmann)TMEM261
Ensembl hg19 (Hinxton)ENSG00000137038 [Gene_View]  chr9:7796491-7799799 [Contig_View]  TMEM261 [Vega]
Ensembl hg38 (Hinxton)ENSG00000137038 [Gene_View]  chr9:7796491-7799799 [Contig_View]  TMEM261 [Vega]
ICGC DataPortalENSG00000137038
TCGA cBioPortalTMEM261
AceView (NCBI)TMEM261
Genatlas (Paris)TMEM261
WikiGenes90871
SOURCE (Princeton)TMEM261
Genetics Home Reference (NIH)TMEM261
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM261  -     chr9:7796491-7799799 -  9p24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM261  -     9p24.1   [Description]    (hg38-Dec_2013)
EnsemblTMEM261 - 9p24.1 [CytoView hg19]  TMEM261 - 9p24.1 [CytoView hg38]
Mapping of homologs : NCBITMEM261 [Mapview hg19]  TMEM261 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128876 AK292632 AL137489 BC009510 BI550091
RefSeq transcript (Entrez)NM_033428
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008413 NW_004929342
Consensus coding sequences : CCDS (NCBI)TMEM261
Cluster EST : UnigeneHs.7517 [ NCBI ]
CGAP (NCI)Hs.7517
Alternative Splicing GalleryENSG00000137038
Gene ExpressionTMEM261 [ NCBI-GEO ]   TMEM261 [ EBI - ARRAY_EXPRESS ]   TMEM261 [ SEEK ]   TMEM261 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM261 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90871
GTEX Portal (Tissue expression)TMEM261
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96GE9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96GE9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96GE9
Splice isoforms : SwissVarQ96GE9
PhosPhoSitePlusQ96GE9
Domains : Interpro (EBI)DUF4536   
Domain families : Pfam (Sanger)DUF4536 (PF15055)   
Domain families : Pfam (NCBI)pfam15055   
Conserved Domain (NCBI)TMEM261
DMDM Disease mutations90871
Blocks (Seattle)TMEM261
SuperfamilyQ96GE9
Human Protein AtlasENSG00000137038
Peptide AtlasQ96GE9
HPRD12939
IPIIPI00477089   IPI00843811   
Protein Interaction databases
DIP (DOE-UCLA)Q96GE9
IntAct (EBI)Q96GE9
FunCoupENSG00000137038
BioGRIDTMEM261
STRING (EMBL)TMEM261
ZODIACTMEM261
Ontologies - Pathways
QuickGOQ96GE9
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM261
Atlas of Cancer Signalling NetworkTMEM261
Wikipedia pathwaysTMEM261
Orthology - Evolution
OrthoDB90871
GeneTree (enSembl)ENSG00000137038
Phylogenetic Trees/Animal Genes : TreeFamTMEM261
HOVERGENQ96GE9
HOGENOMQ96GE9
Homologs : HomoloGeneTMEM261
Homology/Alignments : Family Browser (UCSC)TMEM261
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM261 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM261
dbVarTMEM261
ClinVarTMEM261
1000_GenomesTMEM261 
Exome Variant ServerTMEM261
ExAC (Exome Aggregation Consortium)TMEM261 (select the gene name)
Genetic variants : HAPMAP90871
Genomic Variants (DGV)TMEM261 [DGVbeta]
DECIPHER (Syndromes)9:7796491-7799799  ENSG00000137038
CONAN: Copy Number AnalysisTMEM261 
Mutations
ICGC Data PortalTMEM261 
TCGA Data PortalTMEM261 
Broad Tumor PortalTMEM261
OASIS PortalTMEM261 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM261
BioMutasearch TMEM261
DgiDB (Drug Gene Interaction Database)TMEM261
DoCM (Curated mutations)TMEM261 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM261 (select a term)
intoGenTMEM261
Cancer3DTMEM261(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM261
Genetic Testing Registry TMEM261
NextProtQ96GE9 [Medical]
TSGene90871
GENETestsTMEM261
Huge Navigator TMEM261 [HugePedia]
snp3D : Map Gene to Disease90871
BioCentury BCIQTMEM261
ClinGenTMEM261
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90871
Chemical/Pharm GKB GenePA134876562
Clinical trialTMEM261
Miscellaneous
canSAR (ICR)TMEM261 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM261
EVEXTMEM261
GoPubMedTMEM261
iHOPTMEM261
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:48:52 CET 2017

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