Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMEM262 (transmembrane protein 262)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM262
LocusID (NCBI) 100130348
Atlas_Id 74927
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 65088372 and ends at 65089109 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM262   49389
Cards
Entrez_Gene (NCBI)TMEM262    transmembrane protein 262
Aliases
GeneCards (Weizmann)TMEM262
Ensembl hg19 (Hinxton)ENSG00000187066 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187066 [Gene_View]  ENSG00000187066 [Sequence]  chr11:65088372-65089109 [Contig_View]  TMEM262 [Vega]
ICGC DataPortalENSG00000187066
TCGA cBioPortalTMEM262
AceView (NCBI)TMEM262
Genatlas (Paris)TMEM262
SOURCE (Princeton)TMEM262
Genetics Home Reference (NIH)TMEM262
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM262  -     chr11:65088372-65089109 -  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM262  -     11q13.1   [Description]    (hg19-Feb_2009)
GoldenPathTMEM262 - 11q13.1 [CytoView hg19]  TMEM262 - 11q13.1 [CytoView hg38]
ImmunoBaseENSG00000187066
Genome Data Viewer NCBITMEM262 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA416856 AI015611 AK124141 BX093670 HY032040
RefSeq transcript (Entrez)NM_001242631 NM_001282448
Consensus coding sequences : CCDS (NCBI)TMEM262
Gene ExpressionTMEM262 [ NCBI-GEO ]   TMEM262 [ EBI - ARRAY_EXPRESS ]   TMEM262 [ SEEK ]   TMEM262 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM262 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM262 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100130348
GTEX Portal (Tissue expression)TMEM262
Human Protein AtlasENSG00000187066-TMEM262 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtE9PQX1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtE9PQX1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProE9PQX1
PhosPhoSitePlusE9PQX1
Domains : Interpro (EBI)TM262   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM262
SuperfamilyE9PQX1
AlphaFold pdb e-kbE9PQX1   
Human Protein Atlas [tissue]ENSG00000187066-TMEM262 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)E9PQX1
IntAct (EBI)E9PQX1
BioGRIDTMEM262
STRING (EMBL)TMEM262
ZODIACTMEM262
Ontologies - Pathways
QuickGOE9PQX1
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkTMEM262
Atlas of Cancer Signalling NetworkTMEM262
Wikipedia pathwaysTMEM262
Orthology - Evolution
OrthoDB100130348
GeneTree (enSembl)ENSG00000187066
Phylogenetic Trees/Animal Genes : TreeFamTMEM262
Homologs : HomoloGeneTMEM262
Homology/Alignments : Family Browser (UCSC)TMEM262
Gene fusions - Rearrangements
Fusion : QuiverTMEM262
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM262 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM262
dbVarTMEM262
ClinVarTMEM262
MonarchTMEM262
1000_GenomesTMEM262 
Exome Variant ServerTMEM262
GNOMAD BrowserENSG00000187066
Varsome BrowserTMEM262
ACMGTMEM262 variants
VarityE9PQX1
Genomic Variants (DGV)TMEM262 [DGVbeta]
DECIPHERTMEM262 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM262 
Mutations
ICGC Data PortalTMEM262 
TCGA Data PortalTMEM262 
Broad Tumor PortalTMEM262
OASIS PortalTMEM262 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM262  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM262
Mutations and Diseases : HGMDTMEM262
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM262
DgiDB (Drug Gene Interaction Database)TMEM262
DoCM (Curated mutations)TMEM262
CIViC (Clinical Interpretations of Variants in Cancer)TMEM262
Cancer3DTMEM262
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM262
MedgenTMEM262
Genetic Testing Registry TMEM262
NextProtE9PQX1 [Medical]
GENETestsTMEM262
Target ValidationTMEM262
Huge Navigator TMEM262 [HugePedia]
ClinGenTMEM262
Clinical trials, drugs, therapy
MyCancerGenomeTMEM262
Protein Interactions : CTDTMEM262
Pharm GKB GenePA166123748
PharosE9PQX1
Clinical trialTMEM262
Miscellaneous
canSAR (ICR)TMEM262
HarmonizomeTMEM262
DataMed IndexTMEM262
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM262
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:26:09 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.