Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TMEM263 (transmembrane protein 263)

Identity

Alias (NCBI)C12orf23
HGNC (Hugo) TMEM263
HGNC Alias symbMGC17943
HGNC Previous nameC12orf23
HGNC Previous namechromosome 12 open reading frame 23
LocusID (NCBI) 90488
Atlas_Id 74928
Location 12q23.3  [Link to chromosome band 12q23]
Location_base_pair Starts at 106955907 and ends at 106974035 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
IGFBP7 (4q12) / TMEM263 (12q23.3)TMEM263 (12q23.3) / NKIRAS1 (3p24.2)TMEM263 (12q23.3) / RFX4 (12q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM263   28281
Cards
Entrez_Gene (NCBI)TMEM263    transmembrane protein 263
AliasesC12orf23
GeneCards (Weizmann)TMEM263
Ensembl hg19 (Hinxton)ENSG00000151135 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151135 [Gene_View]  ENSG00000151135 [Sequence]  chr12:106955907-106974035 [Contig_View]  TMEM263 [Vega]
ICGC DataPortalENSG00000151135
TCGA cBioPortalTMEM263
AceView (NCBI)TMEM263
Genatlas (Paris)TMEM263
SOURCE (Princeton)TMEM263
Genetics Home Reference (NIH)TMEM263
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM263  -     chr12:106955907-106974035 +  12q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM263  -     12q23.3   [Description]    (hg19-Feb_2009)
GoldenPathTMEM263 - 12q23.3 [CytoView hg19]  TMEM263 - 12q23.3 [CytoView hg38]
ImmunoBaseENSG00000151135
Genome Data Viewer NCBITMEM263 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK001731 AK021783 AK022770 AK024021 AL117658
RefSeq transcript (Entrez)NM_001319661 NM_001319662 NM_001319663 NM_001319664 NM_001319666 NM_152261
Consensus coding sequences : CCDS (NCBI)TMEM263
Gene ExpressionTMEM263 [ NCBI-GEO ]   TMEM263 [ EBI - ARRAY_EXPRESS ]   TMEM263 [ SEEK ]   TMEM263 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM263 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM263 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90488
GTEX Portal (Tissue expression)TMEM263
Human Protein AtlasENSG00000151135-TMEM263 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WUH6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WUH6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WUH6
PhosPhoSitePlusQ8WUH6
Domains : Interpro (EBI)UPF0444   
Domain families : Pfam (Sanger)UPF0444 (PF15475)   
Domain families : Pfam (NCBI)pfam15475   
Conserved Domain (NCBI)TMEM263
SuperfamilyQ8WUH6
AlphaFold pdb e-kbQ8WUH6   
Human Protein Atlas [tissue]ENSG00000151135-TMEM263 [tissue]
HPRD14462
Protein Interaction databases
DIP (DOE-UCLA)Q8WUH6
IntAct (EBI)Q8WUH6
BioGRIDTMEM263
STRING (EMBL)TMEM263
ZODIACTMEM263
Ontologies - Pathways
QuickGOQ8WUH6
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM263
Atlas of Cancer Signalling NetworkTMEM263
Wikipedia pathwaysTMEM263
Orthology - Evolution
OrthoDB90488
GeneTree (enSembl)ENSG00000151135
Phylogenetic Trees/Animal Genes : TreeFamTMEM263
Homologs : HomoloGeneTMEM263
Homology/Alignments : Family Browser (UCSC)TMEM263
Gene fusions - Rearrangements
Fusion : QuiverTMEM263
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM263 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM263
dbVarTMEM263
ClinVarTMEM263
MonarchTMEM263
1000_GenomesTMEM263 
Exome Variant ServerTMEM263
GNOMAD BrowserENSG00000151135
Varsome BrowserTMEM263
ACMGTMEM263 variants
VarityQ8WUH6
Genomic Variants (DGV)TMEM263 [DGVbeta]
DECIPHERTMEM263 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM263 
Mutations
ICGC Data PortalTMEM263 
TCGA Data PortalTMEM263 
Broad Tumor PortalTMEM263
OASIS PortalTMEM263 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM263  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM263
Mutations and Diseases : HGMDTMEM263
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM263
DgiDB (Drug Gene Interaction Database)TMEM263
DoCM (Curated mutations)TMEM263
CIViC (Clinical Interpretations of Variants in Cancer)TMEM263
Cancer3DTMEM263
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM263
MedgenTMEM263
Genetic Testing Registry TMEM263
NextProtQ8WUH6 [Medical]
GENETestsTMEM263
Target ValidationTMEM263
Huge Navigator TMEM263 [HugePedia]
ClinGenTMEM263
Clinical trials, drugs, therapy
MyCancerGenomeTMEM263
Protein Interactions : CTDTMEM263
Pharm GKB GenePA142672295
PharosQ8WUH6
Clinical trialTMEM263
Miscellaneous
canSAR (ICR)TMEM263
HarmonizomeTMEM263
DataMed IndexTMEM263
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM263
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:09 CEST 2021

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