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TMEM263 (transmembrane protein 263)

Identity

Alias_namesC12orf23
chromosome 12 open reading frame 23
Alias_symbol (synonym)MGC17943
Other alias
HGNC (Hugo) TMEM263
LocusID (NCBI) 90488
Atlas_Id 74928
Location 12q23.3  [Link to chromosome band 12q23]
Location_base_pair Starts at 106955722 and ends at 106974037 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
IGFBP7 (4q12) / TMEM263 (12q23.3)TMEM263 (12q23.3) / NKIRAS1 (3p24.2)TMEM263 (12q23.3) / RFX4 (12q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM263   28281
Cards
Entrez_Gene (NCBI)TMEM263  90488  transmembrane protein 263
AliasesC12orf23
GeneCards (Weizmann)TMEM263
Ensembl hg19 (Hinxton)ENSG00000151135 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151135 [Gene_View]  chr12:106955722-106974037 [Contig_View]  TMEM263 [Vega]
ICGC DataPortalENSG00000151135
TCGA cBioPortalTMEM263
AceView (NCBI)TMEM263
Genatlas (Paris)TMEM263
WikiGenes90488
SOURCE (Princeton)TMEM263
Genetics Home Reference (NIH)TMEM263
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM263  -     chr12:106955722-106974037 +  12q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM263  -     12q23.3   [Description]    (hg19-Feb_2009)
EnsemblTMEM263 - 12q23.3 [CytoView hg19]  TMEM263 - 12q23.3 [CytoView hg38]
Mapping of homologs : NCBITMEM263 [Mapview hg19]  TMEM263 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001731 AK021783 AK022770 AK024021 AL117658
RefSeq transcript (Entrez)NM_001319661 NM_001319662 NM_001319663 NM_001319664 NM_001319666 NM_152261
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM263
Cluster EST : UnigeneHs.257664 [ NCBI ]
CGAP (NCI)Hs.257664
Alternative Splicing GalleryENSG00000151135
Gene ExpressionTMEM263 [ NCBI-GEO ]   TMEM263 [ EBI - ARRAY_EXPRESS ]   TMEM263 [ SEEK ]   TMEM263 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM263 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90488
GTEX Portal (Tissue expression)TMEM263
Human Protein AtlasENSG00000151135-TMEM263 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WUH6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WUH6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WUH6
Splice isoforms : SwissVarQ8WUH6
PhosPhoSitePlusQ8WUH6
Domains : Interpro (EBI)UPF0444   
Domain families : Pfam (Sanger)UPF0444 (PF15475)   
Domain families : Pfam (NCBI)pfam15475   
Conserved Domain (NCBI)TMEM263
DMDM Disease mutations90488
Blocks (Seattle)TMEM263
SuperfamilyQ8WUH6
Human Protein Atlas [tissue]ENSG00000151135-TMEM263 [tissue]
Peptide AtlasQ8WUH6
HPRD14462
IPIIPI00184546   IPI01021107   
Protein Interaction databases
DIP (DOE-UCLA)Q8WUH6
IntAct (EBI)Q8WUH6
FunCoupENSG00000151135
BioGRIDTMEM263
STRING (EMBL)TMEM263
ZODIACTMEM263
Ontologies - Pathways
QuickGOQ8WUH6
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM263
Atlas of Cancer Signalling NetworkTMEM263
Wikipedia pathwaysTMEM263
Orthology - Evolution
OrthoDB90488
GeneTree (enSembl)ENSG00000151135
Phylogenetic Trees/Animal Genes : TreeFamTMEM263
HOVERGENQ8WUH6
HOGENOMQ8WUH6
Homologs : HomoloGeneTMEM263
Homology/Alignments : Family Browser (UCSC)TMEM263
Gene fusions - Rearrangements
Tumor Fusion PortalTMEM263
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM263 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM263
dbVarTMEM263
ClinVarTMEM263
1000_GenomesTMEM263 
Exome Variant ServerTMEM263
ExAC (Exome Aggregation Consortium)ENSG00000151135
GNOMAD BrowserENSG00000151135
Genetic variants : HAPMAP90488
Genomic Variants (DGV)TMEM263 [DGVbeta]
DECIPHERTMEM263 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM263 
Mutations
ICGC Data PortalTMEM263 
TCGA Data PortalTMEM263 
Broad Tumor PortalTMEM263
OASIS PortalTMEM263 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM263
BioMutasearch TMEM263
DgiDB (Drug Gene Interaction Database)TMEM263
DoCM (Curated mutations)TMEM263 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM263 (select a term)
intoGenTMEM263
Cancer3DTMEM263(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM263
MedgenTMEM263
Genetic Testing Registry TMEM263
NextProtQ8WUH6 [Medical]
TSGene90488
GENETestsTMEM263
Target ValidationTMEM263
Huge Navigator TMEM263 [HugePedia]
snp3D : Map Gene to Disease90488
=a hef9../extdef.html#BCIQ TARGET=BCIQ>BioCentury BCIQTMEM263
ClinGenTMEM263
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90488
Chemical/Pharm GKB GenePA142672295
Clinical trialTMEM263
Miscellaneous
canSAR (ICR)TMEM263 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM263
EVEXTMEM263
GoPubMedTMEM263
iHOPTMEM263
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 13:27:38 CET 2017

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