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TMEM267 (transmembrane protein 267)

Identity

Alias_namesC5orf28
chromosome 5 open reading frame 28
Alias_symbol (synonym)FLJ21657
Other alias
HGNC (Hugo) TMEM267
LocusID (NCBI) 64417
Atlas_Id 78572
Location 5p12  [Link to chromosome band 5p12]
Location_base_pair Starts at 43444252 and ends at 43483890 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM267   26139
Cards
Entrez_Gene (NCBI)TMEM267  64417  transmembrane protein 267
AliasesC5orf28
GeneCards (Weizmann)TMEM267
Ensembl hg19 (Hinxton)ENSG00000151881 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151881 [Gene_View]  chr5:43444252-43483890 [Contig_View]  TMEM267 [Vega]
ICGC DataPortalENSG00000151881
TCGA cBioPortalTMEM267
AceView (NCBI)TMEM267
Genatlas (Paris)TMEM267
WikiGenes64417
SOURCE (Princeton)TMEM267
Genetics Home Reference (NIH)TMEM267
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM267  -     chr5:43444252-43483890 -  5p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM267  -     5p12   [Description]    (hg19-Feb_2009)
EnsemblTMEM267 - 5p12 [CytoView hg19]  TMEM267 - 5p12 [CytoView hg38]
Mapping of homologs : NCBITMEM267 [Mapview hg19]  TMEM267 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK025310 AK225220 AK315466 AL137306 BC013351
RefSeq transcript (Entrez)NM_022483
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM267
Cluster EST : UnigeneHs.732093 [ NCBI ]
CGAP (NCI)Hs.732093
Alternative Splicing GalleryENSG00000151881
Gene ExpressionTMEM267 [ NCBI-GEO ]   TMEM267 [ EBI - ARRAY_EXPRESS ]   TMEM267 [ SEEK ]   TMEM267 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM267 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64417
GTEX Portal (Tissue expression)TMEM267
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0VDI3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0VDI3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0VDI3
Splice isoforms : SwissVarQ0VDI3
PhosPhoSitePlusQ0VDI3
Domains : Interpro (EBI)TMEM267   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM267
DMDM Disease mutations64417
Blocks (Seattle)TMEM267
SuperfamilyQ0VDI3
Human Protein AtlasENSG00000151881
Peptide AtlasQ0VDI3
HPRD07965
IPIIPI00101047   IPI00966721   IPI00964355   
Protein Interaction databases
DIP (DOE-UCLA)Q0VDI3
IntAct (EBI)Q0VDI3
FunCoupENSG00000151881
BioGRIDTMEM267
STRING (EMBL)TMEM267
ZODIACTMEM267
Ontologies - Pathways
QuickGOQ0VDI3
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM267
Atlas of Cancer Signalling NetworkTMEM267
Wikipedia pathwaysTMEM267
Orthology - Evolution
OrthoDB64417
GeneTree (enSembl)ENSG00000151881
Phylogenetic Trees/Animal Genes : TreeFamTMEM267
HOVERGENQ0VDI3
HOGENOMQ0VDI3
Homologs : HomoloGeneTMEM267
Homology/Alignments : Family Browser (UCSC)TMEM267
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM267 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM267
dbVarTMEM267
ClinVarTMEM267
1000_GenomesTMEM267 
Exome Variant ServerTMEM267
ExAC (Exome Aggregation Consortium)TMEM267 (select the gene name)
Genetic variants : HAPMAP64417
Genomic Variants (DGV)TMEM267 [DGVbeta]
DECIPHERTMEM267 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM267 
Mutations
ICGC Data PortalTMEM267 
TCGA Data PortalTMEM267 
Broad Tumor PortalTMEM267
OASIS PortalTMEM267 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM267
BioMutasearch TMEM267
DgiDB (Drug Gene Interaction Database)TMEM267
DoCM (Curated mutations)TMEM267 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM267 (select a term)
intoGenTMEM267
Cancer3DTMEM267(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM267
Genetic Testing Registry TMEM267
NextProtQ0VDI3 [Medical]
TSGene64417
GENETestsTMEM267
Target ValidationTMEM267
Huge Navigator TMEM267 [HugePedia]
snp3D : Map Gene to Disease64417
BioCentury BCIQTMEM267
ClinGenTMEM267
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64417
Chemical/Pharm GKB GenePA162380004
Clinical trialTMEM267
Miscellaneous
canSAR (ICR)TMEM267 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM267
EVEXTMEM267
GoPubMedTMEM267
iHOPTMEM267
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:46:18 CEST 2017

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