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TMEM270 (transmembrane protein 270)

Identity

Alias (NCBI)WBSCR28
HGNC (Hugo) TMEM270
HGNC Alias symbMGC26719
HGNC Previous nameWBSCR28
HGNC Previous nameWilliams-Beuren syndrome chromosome region 28
LocusID (NCBI) 135886
Atlas_Id 79704
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 73861159 and ends at 73865890 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)TMEM270   23018
Cards
Entrez_Gene (NCBI)TMEM270    transmembrane protein 270
AliasesWBSCR28
GeneCards (Weizmann)TMEM270
Ensembl hg19 (Hinxton)ENSG00000175877 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175877 [Gene_View]  ENSG00000175877 [Sequence]  chr7:73861159-73865890 [Contig_View]  TMEM270 [Vega]
ICGC DataPortalENSG00000175877
TCGA cBioPortalTMEM270
AceView (NCBI)TMEM270
Genatlas (Paris)TMEM270
SOURCE (Princeton)TMEM270
Genetics Home Reference (NIH)TMEM270
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM270  -     chr7:73861159-73865890 +  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM270  -     7q11.23   [Description]    (hg19-Feb_2009)
GoldenPathTMEM270 - 7q11.23 [CytoView hg19]  TMEM270 - 7q11.23 [CytoView hg38]
ImmunoBaseENSG00000175877
Genome Data Viewer NCBITMEM270 [Mapview hg19]  
OMIM612547   
Gene and transcription
Genbank (Entrez)AA426067 AY372053 AY372054 BC030643
RefSeq transcript (Entrez)NM_182504
Consensus coding sequences : CCDS (NCBI)TMEM270
Gene ExpressionTMEM270 [ NCBI-GEO ]   TMEM270 [ EBI - ARRAY_EXPRESS ]   TMEM270 [ SEEK ]   TMEM270 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM270 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM270 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)135886
GTEX Portal (Tissue expression)TMEM270
Human Protein AtlasENSG00000175877-TMEM270 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UE05   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UE05  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UE05
PhosPhoSitePlusQ6UE05
Domains : Interpro (EBI)WBS28   
Domain families : Pfam (Sanger)WBS28 (PF15164)   
Domain families : Pfam (NCBI)pfam15164   
Conserved Domain (NCBI)TMEM270
SuperfamilyQ6UE05
AlphaFold pdb e-kbQ6UE05   
Human Protein Atlas [tissue]ENSG00000175877-TMEM270 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q6UE05
IntAct (EBI)Q6UE05
BioGRIDTMEM270
STRING (EMBL)TMEM270
ZODIACTMEM270
Ontologies - Pathways
QuickGOQ6UE05
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM270
Atlas of Cancer Signalling NetworkTMEM270
Wikipedia pathwaysTMEM270
Orthology - Evolution
OrthoDB135886
GeneTree (enSembl)ENSG00000175877
Phylogenetic Trees/Animal Genes : TreeFamTMEM270
Homologs : HomoloGeneTMEM270
Homology/Alignments : Family Browser (UCSC)TMEM270
Gene fusions - Rearrangements
Fusion : QuiverTMEM270
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM270 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM270
dbVarTMEM270
ClinVarTMEM270
MonarchTMEM270
1000_GenomesTMEM270 
Exome Variant ServerTMEM270
GNOMAD BrowserENSG00000175877
Varsome BrowserTMEM270
ACMGTMEM270 variants
VarityQ6UE05
Genomic Variants (DGV)TMEM270 [DGVbeta]
DECIPHERTMEM270 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM270 
Mutations
ICGC Data PortalTMEM270 
TCGA Data PortalTMEM270 
Broad Tumor PortalTMEM270
OASIS PortalTMEM270 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM270  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM270
Mutations and Diseases : HGMDTMEM270
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM270
DgiDB (Drug Gene Interaction Database)TMEM270
DoCM (Curated mutations)TMEM270
CIViC (Clinical Interpretations of Variants in Cancer)TMEM270
Cancer3DTMEM270
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612547   
Orphanet
DisGeNETTMEM270
MedgenTMEM270
Genetic Testing Registry TMEM270
NextProtQ6UE05 [Medical]
GENETestsTMEM270
Target ValidationTMEM270
Huge Navigator TMEM270 [HugePedia]
ClinGenTMEM270
Clinical trials, drugs, therapy
MyCancerGenomeTMEM270
Protein Interactions : CTDTMEM270
Pharm GKB GenePA145147726
PharosQ6UE05
Clinical trialTMEM270
Miscellaneous
canSAR (ICR)TMEM270
HarmonizomeTMEM270
DataMed IndexTMEM270
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM270
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:12 CEST 2021

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