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TMEM30CP (transmembrane protein 30C, pseudogene)

Identity

Other aliasCDC50C
TMEM30C
HGNC (Hugo) TMEM30CP
LocusID (NCBI) 644444
Atlas_Id 78801
Location 3q12.1  [Link to chromosome band 3q12]
Location_base_pair Starts at 100185824 and ends at 100194186 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM30CP   30443
Cards
Entrez_Gene (NCBI)TMEM30CP  644444  transmembrane protein 30C, pseudogene
AliasesCDC50C; TMEM30C
GeneCards (Weizmann)TMEM30CP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:100185824-100194186 [Contig_View]  TMEM30CP [Vega]
TCGA cBioPortalTMEM30CP
AceView (NCBI)TMEM30CP
Genatlas (Paris)TMEM30CP
WikiGenes644444
SOURCE (Princeton)TMEM30CP
Genetics Home Reference (NIH)TMEM30CP
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM30CP  -     chr3:100185824-100194186 +  3q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM30CP  -     3q12.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM30CP - 3q12.1 [CytoView hg19]  TMEM30CP - 3q12.1 [CytoView hg38]
Mapping of homologs : NCBITMEM30CP [Mapview hg19]  TMEM30CP [Mapview hg38]
OMIM611030   
Gene and transcription
Genbank (Entrez)AB249666 AB250297
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM30CP
Cluster EST : UnigeneHs.652353 [ NCBI ]
CGAP (NCI)Hs.652353
Gene ExpressionTMEM30CP [ NCBI-GEO ]   TMEM30CP [ EBI - ARRAY_EXPRESS ]   TMEM30CP [ SEEK ]   TMEM30CP [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM30CP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644444
GTEX Portal (Tissue expression)TMEM30CP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM30CP
DMDM Disease mutations644444
Blocks (Seattle)TMEM30CP
IPIIPI00787365   
Protein Interaction databases
BioGRIDTMEM30CP
STRING (EMBL)TMEM30CP
ZODIACTMEM30CP
Ontologies - Pathways
Huge Navigator TMEM30CP [HugePedia]
snp3D : Map Gene to Disease644444
BioCentury BCIQTMEM30CP
ClinGenTMEM30CP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644444
Chemical/Pharm GKB GenePA134950014
Clinical trialTMEM30CP
Miscellaneous
canSAR (ICR)TMEM30CP (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM30CP
EVEXTMEM30CP
GoPubMedTMEM30CP
iHOPTMEM30CP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:09:16 CET 2017

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