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TMEM31 (transmembrane protein 31)

Identity

Alias_symbol (synonym)MGC39655
Other alias-
HGNC (Hugo) TMEM31
LocusID (NCBI) 203562
Atlas_Id 74933
Location Xq22.2  [Link to chromosome band Xq22]
Location_base_pair Starts at 103710909 and ends at 103714032 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM31   28601
Cards
Entrez_Gene (NCBI)TMEM31  203562  transmembrane protein 31
Aliases
GeneCards (Weizmann)TMEM31
Ensembl hg19 (Hinxton)ENSG00000179363 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179363 [Gene_View]  chrX:103710909-103714032 [Contig_View]  TMEM31 [Vega]
ICGC DataPortalENSG00000179363
TCGA cBioPortalTMEM31
AceView (NCBI)TMEM31
Genatlas (Paris)TMEM31
WikiGenes203562
SOURCE (Princeton)TMEM31
Genetics Home Reference (NIH)TMEM31
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM31  -     chrX:103710909-103714032 +  Xq22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM31  -     Xq22.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM31 - Xq22.2 [CytoView hg19]  TMEM31 - Xq22.2 [CytoView hg38]
Mapping of homologs : NCBITMEM31 [Mapview hg19]  TMEM31 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK130867 BC029575 DQ891514 DQ894705 HM005598
RefSeq transcript (Entrez)NM_182541
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM31
Cluster EST : UnigeneHs.98843 [ NCBI ]
CGAP (NCI)Hs.98843
Alternative Splicing GalleryENSG00000179363
Gene ExpressionTMEM31 [ NCBI-GEO ]   TMEM31 [ EBI - ARRAY_EXPRESS ]   TMEM31 [ SEEK ]   TMEM31 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM31 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)203562
GTEX Portal (Tissue expression)TMEM31
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JXX7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JXX7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JXX7
Splice isoforms : SwissVarQ5JXX7
PhosPhoSitePlusQ5JXX7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM31
DMDM Disease mutations203562
Blocks (Seattle)TMEM31
SuperfamilyQ5JXX7
Human Protein AtlasENSG00000179363
Peptide AtlasQ5JXX7
HPRD06652
IPIIPI00640412   
Protein Interaction databases
DIP (DOE-UCLA)Q5JXX7
IntAct (EBI)Q5JXX7
FunCoupENSG00000179363
BioGRIDTMEM31
STRING (EMBL)TMEM31
ZODIACTMEM31
Ontologies - Pathways
QuickGOQ5JXX7
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkTMEM31
Atlas of Cancer Signalling NetworkTMEM31
Wikipedia pathwaysTMEM31
Orthology - Evolution
OrthoDB203562
GeneTree (enSembl)ENSG00000179363
Phylogenetic Trees/Animal Genes : TreeFamTMEM31
HOVERGENQ5JXX7
HOGENOMQ5JXX7
Homologs : HomoloGeneTMEM31
Homology/Alignments : Family Browser (UCSC)TMEM31
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM31
dbVarTMEM31
ClinVarTMEM31
1000_GenomesTMEM31 
Exome Variant ServerTMEM31
ExAC (Exome Aggregation Consortium)TMEM31 (select the gene name)
Genetic variants : HAPMAP203562
Genomic Variants (DGV)TMEM31 [DGVbeta]
DECIPHERTMEM31 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM31 
Mutations
ICGC Data PortalTMEM31 
TCGA Data PortalTMEM31 
Broad Tumor PortalTMEM31
OASIS PortalTMEM31 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM31  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM31
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM31
DgiDB (Drug Gene Interaction Database)TMEM31
DoCM (Curated mutations)TMEM31 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM31 (select a term)
intoGenTMEM31
Cancer3DTMEM31(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM31
Genetic Testing Registry TMEM31
NextProtQ5JXX7 [Medical]
TSGene203562
GENETestsTMEM31
Huge Navigator TMEM31 [HugePedia]
snp3D : Map Gene to Disease203562
BioCentury BCIQTMEM31
ClinGenTMEM31
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD203562
Chemical/Pharm GKB GenePA134926659
Clinical trialTMEM31
Miscellaneous
canSAR (ICR)TMEM31 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM31
EVEXTMEM31
GoPubMedTMEM31
iHOPTMEM31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:58:49 CEST 2017

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