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TMEM35 (transmembrane protein 35)

Identity

Other alias-
HGNC (Hugo) TMEM35
LocusID (NCBI) 59353
Atlas_Id 74935
Location Xq22.1  [Link to chromosome band Xq22]
Location_base_pair Starts at 100333836 and ends at 100351355 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM35   25864
Cards
Entrez_Gene (NCBI)TMEM35  59353  transmembrane protein 35
Aliases
GeneCards (Weizmann)TMEM35
Ensembl hg19 (Hinxton)ENSG00000126950 [Gene_View]  chrX:100333836-100351355 [Contig_View]  TMEM35 [Vega]
Ensembl hg38 (Hinxton)ENSG00000126950 [Gene_View]  chrX:100333836-100351355 [Contig_View]  TMEM35 [Vega]
ICGC DataPortalENSG00000126950
TCGA cBioPortalTMEM35
AceView (NCBI)TMEM35
Genatlas (Paris)TMEM35
WikiGenes59353
SOURCE (Princeton)TMEM35
Genetics Home Reference (NIH)TMEM35
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM35  -     chrX:100333836-100351355 +  Xq22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM35  -     Xq22.1   [Description]    (hg38-Dec_2013)
EnsemblTMEM35 - Xq22.1 [CytoView hg19]  TMEM35 - Xq22.1 [CytoView hg38]
Mapping of homologs : NCBITMEM35 [Mapview hg19]  TMEM35 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024146 AK223240 AK297745 BC050273 BC078658
RefSeq transcript (Entrez)NM_021637
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011651 NW_004929444
Consensus coding sequences : CCDS (NCBI)TMEM35
Cluster EST : UnigeneHs.714277 [ NCBI ]
CGAP (NCI)Hs.714277
Alternative Splicing GalleryENSG00000126950
Gene ExpressionTMEM35 [ NCBI-GEO ]   TMEM35 [ EBI - ARRAY_EXPRESS ]   TMEM35 [ SEEK ]   TMEM35 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM35 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)59353
GTEX Portal (Tissue expression)TMEM35
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ53FP2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ53FP2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ53FP2
Splice isoforms : SwissVarQ53FP2
PhosPhoSitePlusQ53FP2
Domains : Interpro (EBI)TMEM35   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM35
DMDM Disease mutations59353
Blocks (Seattle)TMEM35
SuperfamilyQ53FP2
Human Protein AtlasENSG00000126950
Peptide AtlasQ53FP2
HPRD06523
IPIIPI00012474   IPI00909047   
Protein Interaction databases
DIP (DOE-UCLA)Q53FP2
IntAct (EBI)Q53FP2
FunCoupENSG00000126950
BioGRIDTMEM35
STRING (EMBL)TMEM35
ZODIACTMEM35
Ontologies - Pathways
QuickGOQ53FP2
Ontology : AmiGOmolecular_function  cellular_component  peroxisomal membrane  biological_process  integral component of membrane  cytoplasmic membrane-bounded vesicle  
Ontology : EGO-EBImolecular_function  cellular_component  peroxisomal membrane  biological_process  integral component of membrane  cytoplasmic membrane-bounded vesicle  
NDEx NetworkTMEM35
Atlas of Cancer Signalling NetworkTMEM35
Wikipedia pathwaysTMEM35
Orthology - Evolution
OrthoDB59353
GeneTree (enSembl)ENSG00000126950
Phylogenetic Trees/Animal Genes : TreeFamTMEM35
HOVERGENQ53FP2
HOGENOMQ53FP2
Homologs : HomoloGeneTMEM35
Homology/Alignments : Family Browser (UCSC)TMEM35
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM35 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM35
dbVarTMEM35
ClinVarTMEM35
1000_GenomesTMEM35 
Exome Variant ServerTMEM35
ExAC (Exome Aggregation Consortium)TMEM35 (select the gene name)
Genetic variants : HAPMAP59353
Genomic Variants (DGV)TMEM35 [DGVbeta]
DECIPHER (Syndromes)X:100333836-100351355  ENSG00000126950
CONAN: Copy Number AnalysisTMEM35 
Mutations
ICGC Data PortalTMEM35 
TCGA Data PortalTMEM35 
Broad Tumor PortalTMEM35
OASIS PortalTMEM35 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM35  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM35
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM35
DgiDB (Drug Gene Interaction Database)TMEM35
DoCM (Curated mutations)TMEM35 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM35 (select a term)
intoGenTMEM35
Cancer3DTMEM35(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM35
Genetic Testing Registry TMEM35
NextProtQ53FP2 [Medical]
TSGene59353
GENETestsTMEM35
Huge Navigator TMEM35 [HugePedia]
snp3D : Map Gene to Disease59353
BioCentury BCIQTMEM35
ClinGenTMEM35
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD59353
Chemical/Pharm GKB GenePA134905238
Clinical trialTMEM35
Miscellaneous
canSAR (ICR)TMEM35 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM35
EVEXTMEM35
GoPubMedTMEM35
iHOPTMEM35
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:48:55 CET 2017

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