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TMEM35A (transmembrane protein 35A)

Identity

Other aliasTMEM35
HGNC (Hugo) TMEM35A
LocusID (NCBI) 59353
Atlas_Id 78776
Location Xq22.1  [Link to chromosome band Xq22]
Location_base_pair Starts at 101078847 and ends at 101096366 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM35A   25864
Cards
Entrez_Gene (NCBI)TMEM35A  59353  transmembrane protein 35A
AliasesTMEM35
GeneCards (Weizmann)TMEM35A
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:101078847-101096366 [Contig_View]  TMEM35A [Vega]
TCGA cBioPortalTMEM35A
AceView (NCBI)TMEM35A
Genatlas (Paris)TMEM35A
WikiGenes59353
SOURCE (Princeton)TMEM35A
Genetics Home Reference (NIH)TMEM35A
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM35A  -     chrX:101078847-101096366 +  Xq22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM35A  -     Xq22.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM35A - Xq22.1 [CytoView hg19]  TMEM35A - Xq22.1 [CytoView hg38]
Mapping of homologs : NCBITMEM35A [Mapview hg19]  TMEM35A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024146 AK223240 AK297745 BC050273 BC078658
RefSeq transcript (Entrez)NM_021637
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM35A
Cluster EST : UnigeneHs.714277 [ NCBI ]
CGAP (NCI)Hs.714277
Gene ExpressionTMEM35A [ NCBI-GEO ]   TMEM35A [ EBI - ARRAY_EXPRESS ]   TMEM35A [ SEEK ]   TMEM35A [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM35A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)59353
GTEX Portal (Tissue expression)TMEM35A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ53FP2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ53FP2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ53FP2
Splice isoforms : SwissVarQ53FP2
PhosPhoSitePlusQ53FP2
Domains : Interpro (EBI)DoxX    TMEM35A   
Domain families : Pfam (Sanger)DoxX_2 (PF13564)   
Domain families : Pfam (NCBI)pfam13564   
Conserved Domain (NCBI)TMEM35A
DMDM Disease mutations59353
Blocks (Seattle)TMEM35A
SuperfamilyQ53FP2
Peptide AtlasQ53FP2
HPRD06523
IPIIPI00012474   IPI00909047   
Protein Interaction databases
DIP (DOE-UCLA)Q53FP2
IntAct (EBI)Q53FP2
BioGRIDTMEM35A
STRING (EMBL)TMEM35A
ZODIACTMEM35A
Ontologies - Pathways
QuickGOQ53FP2
Ontology : AmiGOmolecular_function  cellular_component  peroxisomal membrane  biological_process  integral component of membrane  cytoplasmic vesicle  
Ontology : EGO-EBImolecular_function  cellular_component  peroxisomal membrane  biological_process  integral component of membrane  cytoplasmic vesicle  
NDEx NetworkTMEM35A
Atlas of Cancer Signalling NetworkTMEM35A
Wikipedia pathwaysTMEM35A
Orthology - Evolution
OrthoDB59353
Phylogenetic Trees/Animal Genes : TreeFamTMEM35A
HOVERGENQ53FP2
HOGENOMQ53FP2
Homologs : HomoloGeneTMEM35A
Homology/Alignments : Family Browser (UCSC)TMEM35A
Gene fusions - Rearrangements
Tumor Fusion PortalTMEM35A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM35A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM35A
dbVarTMEM35A
ClinVarTMEM35A
1000_GenomesTMEM35A 
Exome Variant ServerTMEM35A
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP59353
Genomic Variants (DGV)TMEM35A [DGVbeta]
DECIPHERTMEM35A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM35A 
Mutations
ICGC Data PortalTMEM35A 
TCGA Data PortalTMEM35A 
Broad Tumor PortalTMEM35A
OASIS PortalTMEM35A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM35A
BioMutasearch TMEM35A
DgiDB (Drug Gene Interaction Database)TMEM35A
DoCM (Curated mutations)TMEM35A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM35A (select a term)
intoGenTMEM35A
Cancer3DTMEM35A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM35A
MedgenTMEM35A
Genetic Testing Registry TMEM35A
NextProtQ53FP2 [Medical]
TSGene59353
GENETestsTMEM35A
Target ValidationTMEM35A
Huge Navigator TMEM35A [HugePedia]
snp3D : Map Gene to Disease59353
BioCentury BCIQTMEM35A
ClinGenTMEM35A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD59353
Chemical/Pharm GKB GenePA134905238
Clinical trialTMEM35A
Miscellaneous
canSAR (ICR)TMEM35A (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM35A
EVEXTMEM35A
GoPubMedTMEM35A
iHOPTMEM35A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:00:49 CET 2017

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