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TMEM35B (transmembrane protein 35B)

Identity

Alias_namesZMYM6NB
ZMYM6 neighbor
Other alias
HGNC (Hugo) TMEM35B
LocusID (NCBI) 100506144
Atlas_Id 78354
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 34981526 and ends at 34985347 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM35B   40021
Cards
Entrez_Gene (NCBI)TMEM35B  100506144  transmembrane protein 35B
AliasesZMYM6NB
GeneCards (Weizmann)TMEM35B
Ensembl hg19 (Hinxton)ENSG00000243749 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000243749 [Gene_View]  chr1:34981526-34985347 [Contig_View]  TMEM35B [Vega]
ICGC DataPortalENSG00000243749
TCGA cBioPortalTMEM35B
AceView (NCBI)TMEM35B
Genatlas (Paris)TMEM35B
WikiGenes100506144
SOURCE (Princeton)TMEM35B
Genetics Home Reference (NIH)TMEM35B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM35B  -     chr1:34981526-34985347 -  1p34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM35B  -     1p34.3   [Description]    (hg19-Feb_2009)
EnsemblTMEM35B - 1p34.3 [CytoView hg19]  TMEM35B - 1p34.3 [CytoView hg38]
Mapping of homologs : NCBITMEM35B [Mapview hg19]  TMEM35B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA846430 AK129824 BC029439 BU076143 DB447268
RefSeq transcript (Entrez)NM_001195156
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM35B
Cluster EST : UnigeneHs.533986 [ NCBI ]
CGAP (NCI)Hs.533986
Alternative Splicing GalleryENSG00000243749
Gene ExpressionTMEM35B [ NCBI-GEO ]   TMEM35B [ EBI - ARRAY_EXPRESS ]   TMEM35B [ SEEK ]   TMEM35B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM35B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506144
GTEX Portal (Tissue expression)TMEM35B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCS4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCS4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCS4
Splice isoforms : SwissVarQ8NCS4
PhosPhoSitePlusQ8NCS4
Domains : Interpro (EBI)DoxX   
Domain families : Pfam (Sanger)DoxX_2 (PF13564)   
Domain families : Pfam (NCBI)pfam13564   
Conserved Domain (NCBI)TMEM35B
DMDM Disease mutations100506144
Blocks (Seattle)TMEM35B
SuperfamilyQ8NCS4
Human Protein AtlasENSG00000243749
Peptide AtlasQ8NCS4
IPIIPI00168438   
Protein Interaction databases
DIP (DOE-UCLA)Q8NCS4
IntAct (EBI)Q8NCS4
FunCoupENSG00000243749
BioGRIDTMEM35B
STRING (EMBL)TMEM35B
ZODIACTMEM35B
Ontologies - Pathways
QuickGOQ8NCS4
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM35B
Atlas of Cancer Signalling NetworkTMEM35B
Wikipedia pathwaysTMEM35B
Orthology - Evolution
OrthoDB100506144
GeneTree (enSembl)ENSG00000243749
Phylogenetic Trees/Animal Genes : TreeFamTMEM35B
HOVERGENQ8NCS4
HOGENOMQ8NCS4
Homologs : HomoloGeneTMEM35B
Homology/Alignments : Family Browser (UCSC)TMEM35B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM35B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM35B
dbVarTMEM35B
ClinVarTMEM35B
1000_GenomesTMEM35B 
Exome Variant ServerTMEM35B
ExAC (Exome Aggregation Consortium)TMEM35B (select the gene name)
Genetic variants : HAPMAP100506144
Genomic Variants (DGV)TMEM35B [DGVbeta]
DECIPHERTMEM35B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM35B 
Mutations
ICGC Data PortalTMEM35B 
TCGA Data PortalTMEM35B 
Broad Tumor PortalTMEM35B
OASIS PortalTMEM35B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM35B
BioMutasearch TMEM35B
DgiDB (Drug Gene Interaction Database)TMEM35B
DoCM (Curated mutations)TMEM35B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM35B (select a term)
intoGenTMEM35B
Cancer3DTMEM35B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM35B
Genetic Testing Registry TMEM35B
NextProtQ8NCS4 [Medical]
TSGene100506144
GENETestsTMEM35B
Target ValidationTMEM35B
Huge Navigator TMEM35B [HugePedia]
snp3D : Map Gene to Disease100506144
BioCentury BCIQTMEM35B
ClinGenTMEM35B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506144
Chemical/Pharm GKB GenePA166049044
Clinical trialTMEM35B
Miscellaneous
canSAR (ICR)TMEM35B (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM35B
EVEXTMEM35B
GoPubMedTMEM35B
iHOPTMEM35B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:46:20 CEST 2017

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