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TMEM35B (transmembrane protein 35B)

Identity

Alias (NCBI)ZMYM6NB
HGNC (Hugo) TMEM35B
HGNC Previous nameZMYM6NB
HGNC Previous nameZMYM6 neighbor
LocusID (NCBI) 100506144
Atlas_Id 78354
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 34981526 and ends at 34985347 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM35B   40021
Cards
Entrez_Gene (NCBI)TMEM35B    transmembrane protein 35B
AliasesZMYM6NB
GeneCards (Weizmann)TMEM35B
Ensembl hg19 (Hinxton)ENSG00000243749 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000243749 [Gene_View]  ENSG00000243749 [Sequence]  chr1:34981526-34985347 [Contig_View]  TMEM35B [Vega]
ICGC DataPortalENSG00000243749
TCGA cBioPortalTMEM35B
AceView (NCBI)TMEM35B
Genatlas (Paris)TMEM35B
SOURCE (Princeton)TMEM35B
Genetics Home Reference (NIH)TMEM35B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM35B  -     chr1:34981526-34985347 -  1p34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM35B  -     1p34.3   [Description]    (hg19-Feb_2009)
GoldenPathTMEM35B - 1p34.3 [CytoView hg19]  TMEM35B - 1p34.3 [CytoView hg38]
ImmunoBaseENSG00000243749
Genome Data Viewer NCBITMEM35B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA846430 AK129824 BC029439 BU076143 DB447268
RefSeq transcript (Entrez)NM_001195156
Consensus coding sequences : CCDS (NCBI)TMEM35B
Gene ExpressionTMEM35B [ NCBI-GEO ]   TMEM35B [ EBI - ARRAY_EXPRESS ]   TMEM35B [ SEEK ]   TMEM35B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM35B [ Firebrowse - Broad ]
GenevisibleExpression of TMEM35B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506144
GTEX Portal (Tissue expression)TMEM35B
Human Protein AtlasENSG00000243749-TMEM35B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCS4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCS4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCS4
PhosPhoSitePlusQ8NCS4
Domains : Interpro (EBI)DoxX    TM35A/B   
Domain families : Pfam (Sanger)DoxX_2 (PF13564)   
Domain families : Pfam (NCBI)pfam13564   
Conserved Domain (NCBI)TMEM35B
SuperfamilyQ8NCS4
AlphaFold pdb e-kbQ8NCS4   
Human Protein Atlas [tissue]ENSG00000243749-TMEM35B [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8NCS4
IntAct (EBI)Q8NCS4
BioGRIDTMEM35B
STRING (EMBL)TMEM35B
ZODIACTMEM35B
Ontologies - Pathways
QuickGOQ8NCS4
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM35B
Atlas of Cancer Signalling NetworkTMEM35B
Wikipedia pathwaysTMEM35B
Orthology - Evolution
OrthoDB100506144
GeneTree (enSembl)ENSG00000243749
Phylogenetic Trees/Animal Genes : TreeFamTMEM35B
Homologs : HomoloGeneTMEM35B
Homology/Alignments : Family Browser (UCSC)TMEM35B
Gene fusions - Rearrangements
Fusion : QuiverTMEM35B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM35B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM35B
dbVarTMEM35B
ClinVarTMEM35B
MonarchTMEM35B
1000_GenomesTMEM35B 
Exome Variant ServerTMEM35B
GNOMAD BrowserENSG00000243749
Varsome BrowserTMEM35B
ACMGTMEM35B variants
VarityQ8NCS4
Genomic Variants (DGV)TMEM35B [DGVbeta]
DECIPHERTMEM35B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM35B 
Mutations
ICGC Data PortalTMEM35B 
TCGA Data PortalTMEM35B 
Broad Tumor PortalTMEM35B
OASIS PortalTMEM35B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM35B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM35B
Mutations and Diseases : HGMDTMEM35B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM35B
DgiDB (Drug Gene Interaction Database)TMEM35B
DoCM (Curated mutations)TMEM35B
CIViC (Clinical Interpretations of Variants in Cancer)TMEM35B
Cancer3DTMEM35B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM35B
MedgenTMEM35B
Genetic Testing Registry TMEM35B
NextProtQ8NCS4 [Medical]
GENETestsTMEM35B
Target ValidationTMEM35B
Huge Navigator TMEM35B [HugePedia]
ClinGenTMEM35B
Clinical trials, drugs, therapy
MyCancerGenomeTMEM35B
Protein Interactions : CTDTMEM35B
Pharm GKB GenePA166049044
PharosQ8NCS4
Clinical trialTMEM35B
Miscellaneous
canSAR (ICR)TMEM35B
HarmonizomeTMEM35B
DataMed IndexTMEM35B
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM35B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:26:14 CEST 2021

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