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TMEM37 (transmembrane protein 37)

Identity

Alias_symbol (synonym)PR1
PR
Other alias
HGNC (Hugo) TMEM37
LocusID (NCBI) 140738
Atlas_Id 74936
Location 2q14.2  [Link to chromosome band 2q14]
Location_base_pair Starts at 119431870 and ends at 119438520 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM37 (2q14.2) / UBAP2 (9p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM37   18216
Cards
Entrez_Gene (NCBI)TMEM37  140738  transmembrane protein 37
AliasesPR; PR1
GeneCards (Weizmann)TMEM37
Ensembl hg19 (Hinxton)ENSG00000171227 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171227 [Gene_View]  chr2:119431870-119438520 [Contig_View]  TMEM37 [Vega]
ICGC DataPortalENSG00000171227
TCGA cBioPortalTMEM37
AceView (NCBI)TMEM37
Genatlas (Paris)TMEM37
WikiGenes140738
SOURCE (Princeton)TMEM37
Genetics Home Reference (NIH)TMEM37
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM37  -     chr2:119431870-119438520 +  2q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM37  -     2q14.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM37 - 2q14.2 [CytoView hg19]  TMEM37 - 2q14.2 [CytoView hg38]
Mapping of homologs : NCBITMEM37 [Mapview hg19]  TMEM37 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF361356 AK026464 BC046362 DR003856 DR005637
RefSeq transcript (Entrez)NM_183240
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM37
Cluster EST : UnigeneHs.26216 [ NCBI ]
CGAP (NCI)Hs.26216
Alternative Splicing GalleryENSG00000171227
Gene ExpressionTMEM37 [ NCBI-GEO ]   TMEM37 [ EBI - ARRAY_EXPRESS ]   TMEM37 [ SEEK ]   TMEM37 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM37 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140738
GTEX Portal (Tissue expression)TMEM37
Human Protein AtlasENSG00000171227-TMEM37 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WXS4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WXS4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WXS4
Splice isoforms : SwissVarQ8WXS4
PhosPhoSitePlusQ8WXS4
Domains : Interpro (EBI)Tmem37   
Domain families : Pfam (Sanger)TMEM37 (PF15108)   
Domain families : Pfam (NCBI)pfam15108   
Conserved Domain (NCBI)TMEM37
DMDM Disease mutations140738
Blocks (Seattle)TMEM37
SuperfamilyQ8WXS4
Human Protein Atlas [tissue]ENSG00000171227-TMEM37 [tissue]
Peptide AtlasQ8WXS4
HPRD15536
IPIIPI00103601   IPI00917792   IPI00916052   
Protein Interaction databases
DIP (DOE-UCLA)Q8WXS4
IntAct (EBI)Q8WXS4
FunCoupENSG00000171227
BioGRIDTMEM37
STRING (EMBL)TMEM37
ZODIACTMEM37
Ontologies - Pathways
QuickGOQ8WXS4
Ontology : AmiGOvoltage-gated ion channel activity  calcium channel activity  integral component of membrane  regulation of ion transmembrane transport  calcium ion transmembrane transport  
Ontology : EGO-EBIvoltage-gated ion channel activity  calcium channel activity  integral component of membrane  regulation of ion transmembrane transport  calcium ion transmembrane transport  
NDEx NetworkTMEM37
Atlas of Cancer Signalling NetworkTMEM37
Wikipedia pathwaysTMEM37
Orthology - Evolution
OrthoDB140738
GeneTree (enSembl)ENSG00000171227
Phylogenetic Trees/Animal Genes : TreeFamTMEM37
HOVERGENQ8WXS4
HOGENOMQ8WXS4
Homologs : HomoloGeneTMEM37
Homology/Alignments : Family Browser (UCSC)TMEM37
Gene fusions - Rearrangements
Fusion: Tumor Portal TMEM37
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM37 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM37
dbVarTMEM37
ClinVarTMEM37
1000_GenomesTMEM37 
Exome Variant ServerTMEM37
ExAC (Exome Aggregation Consortium)ENSG00000171227
GNOMAD BrowserENSG00000171227
Genetic variants : HAPMAP140738
Genomic Variants (DGV)TMEM37 [DGVbeta]
DECIPHERTMEM37 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM37 
Mutations
ICGC Data PortalTMEM37 
TCGA Data PortalTMEM37 
Broad Tumor PortalTMEM37
OASIS PortalTMEM37 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM37  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM37
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM37
DgiDB (Drug Gene Interaction Database)TMEM37
DoCM (Curated mutations)TMEM37 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM37 (select a term)
intoGenTMEM37
Cancer3DTMEM37(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM37
Genetic Testing Registry TMEM37
NextProtQ8WXS4 [Medical]
TSGene140738
GENETestsTMEM37
Target ValidationTMEM37
Huge Navigator TMEM37 [HugePedia]
snp3D : Map Gene to Disease140738
BioCentury BCIQTMEM37
ClinGenTMEM37
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140738
Chemical/Pharm GKB GenePA134897608
Clinical trialTMEM37
Miscellaneous
canSAR (ICR)TMEM37 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM37
EVEXTMEM37
GoPubMedTMEM37
iHOPTMEM37
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Nov 9 12:33:11 CET 2017

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