Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TMEM51-AS1 (TMEM51 antisense RNA 1)

Identity

Alias_namesC1orf126
chromosome 1 open reading frame 126
Alias_symbol (synonym)FLJ23703
Other alias
HGNC (Hugo) TMEM51-AS1
LocusID (NCBI) 200197
Atlas_Id 74953
Location 1p36.21  [Link to chromosome band 1p36]
Location_base_pair Starts at 15115953 and ends at 15152464 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)TMEM51-AS1   26301
Cards
Entrez_Gene (NCBI)TMEM51-AS1  200197  TMEM51 antisense RNA 1
AliasesC1orf126
GeneCards (Weizmann)TMEM51-AS1
Ensembl hg19 (Hinxton)ENSG00000175147 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175147 [Gene_View]  ENSG00000175147 [Sequence]  chr1:15115953-15152464 [Contig_View]  TMEM51-AS1 [Vega]
ICGC DataPortalENSG00000175147
TCGA cBioPortalTMEM51-AS1
AceView (NCBI)TMEM51-AS1
Genatlas (Paris)TMEM51-AS1
WikiGenes200197
SOURCE (Princeton)TMEM51-AS1
Genetics Home Reference (NIH)TMEM51-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM51-AS1  -     chr1:15115953-15152464 -  1p36.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM51-AS1  -     1p36.21   [Description]    (hg19-Feb_2009)
GoldenPathTMEM51-AS1 - 1p36.21 [CytoView hg19]  TMEM51-AS1 - 1p36.21 [CytoView hg38]
ImmunoBaseENSG00000175147
Mapping of homologs : NCBITMEM51-AS1 [Mapview hg19]  TMEM51-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK074283 AK124431 BC128126 BC128127
RefSeq transcript (Entrez)NM_182534
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM51-AS1
Cluster EST : UnigeneHs.531424 [ NCBI ]
CGAP (NCI)Hs.531424
Alternative Splicing GalleryENSG00000175147
Gene ExpressionTMEM51-AS1 [ NCBI-GEO ]   TMEM51-AS1 [ EBI - ARRAY_EXPRESS ]   TMEM51-AS1 [ SEEK ]   TMEM51-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM51-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)200197
GTEX Portal (Tissue expression)TMEM51-AS1
Human Protein AtlasENSG00000175147-TMEM51-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM51-AS1
DMDM Disease mutations200197
Blocks (Seattle)TMEM51-AS1
Human Protein Atlas [tissue]ENSG00000175147-TMEM51-AS1 [tissue]
HPRD08673
IPIIPI00152697   IPI00742716   
Protein Interaction databases
FunCoupENSG00000175147
BioGRIDTMEM51-AS1
STRING (EMBL)TMEM51-AS1
ZODIACTMEM51-AS1
Ontologies - Pathways
Huge Navigator TMEM51-AS1 [HugePedia]
snp3D : Map Gene to Disease200197
BioCentury BCIQTMEM51-AS1
ClinGenTMEM51-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD200197
Chemical/Pharm GKB GenePA142672444
Clinical trialTMEM51-AS1
Miscellaneous
canSAR (ICR)TMEM51-AS1 (select the gene name)
DataMed IndexTMEM51-AS1
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM51-AS1
EVEXTMEM51-AS1
GoPubMedTMEM51-AS1
iHOPTMEM51-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:10:43 CEST 2019
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