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TMEM61 (transmembrane protein 61)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM61
LocusID (NCBI) 199964
Atlas_Id 74964
Location 1p32.3  [Link to chromosome band 1p32]
Location_base_pair Starts at 54980628 and ends at 54992288 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
RNF11 (1p32.3) / TMEM61 (1p32.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM61   27296
Cards
Entrez_Gene (NCBI)TMEM61    transmembrane protein 61
Aliases
GeneCards (Weizmann)TMEM61
Ensembl hg19 (Hinxton)ENSG00000143001 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000143001 [Gene_View]  ENSG00000143001 [Sequence]  chr1:54980628-54992288 [Contig_View]  TMEM61 [Vega]
ICGC DataPortalENSG00000143001
TCGA cBioPortalTMEM61
AceView (NCBI)TMEM61
Genatlas (Paris)TMEM61
SOURCE (Princeton)TMEM61
Genetics Home Reference (NIH)TMEM61
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM61  -     chr1:54980628-54992288 +  1p32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM61  -     1p32.3   [Description]    (hg19-Feb_2009)
GoldenPathTMEM61 - 1p32.3 [CytoView hg19]  TMEM61 - 1p32.3 [CytoView hg38]
ImmunoBaseENSG00000143001
Genome Data Viewer NCBITMEM61 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA918832 BC029775 BG430102
RefSeq transcript (Entrez)NM_182532
Consensus coding sequences : CCDS (NCBI)TMEM61
Gene ExpressionTMEM61 [ NCBI-GEO ]   TMEM61 [ EBI - ARRAY_EXPRESS ]   TMEM61 [ SEEK ]   TMEM61 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM61 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM61 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)199964
GTEX Portal (Tissue expression)TMEM61
Human Protein AtlasENSG00000143001-TMEM61 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N0U2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N0U2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N0U2
PhosPhoSitePlusQ8N0U2
Domains : Interpro (EBI)TMEM61   
Domain families : Pfam (Sanger)TMEM61 (PF15105)   
Domain families : Pfam (NCBI)pfam15105   
Conserved Domain (NCBI)TMEM61
SuperfamilyQ8N0U2
AlphaFold pdb e-kbQ8N0U2   
Human Protein Atlas [tissue]ENSG00000143001-TMEM61 [tissue]
HPRD14121
Protein Interaction databases
DIP (DOE-UCLA)Q8N0U2
IntAct (EBI)Q8N0U2
BioGRIDTMEM61
STRING (EMBL)TMEM61
ZODIACTMEM61
Ontologies - Pathways
QuickGOQ8N0U2
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkTMEM61
Atlas of Cancer Signalling NetworkTMEM61
Wikipedia pathwaysTMEM61
Orthology - Evolution
OrthoDB199964
GeneTree (enSembl)ENSG00000143001
Phylogenetic Trees/Animal Genes : TreeFamTMEM61
Homologs : HomoloGeneTMEM61
Homology/Alignments : Family Browser (UCSC)TMEM61
Gene fusions - Rearrangements
Fusion : QuiverTMEM61
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM61 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM61
dbVarTMEM61
ClinVarTMEM61
MonarchTMEM61
1000_GenomesTMEM61 
Exome Variant ServerTMEM61
GNOMAD BrowserENSG00000143001
Varsome BrowserTMEM61
ACMGTMEM61 variants
VarityQ8N0U2
Genomic Variants (DGV)TMEM61 [DGVbeta]
DECIPHERTMEM61 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM61 
Mutations
ICGC Data PortalTMEM61 
TCGA Data PortalTMEM61 
Broad Tumor PortalTMEM61
OASIS PortalTMEM61 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM61  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM61
Mutations and Diseases : HGMDTMEM61
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM61
DgiDB (Drug Gene Interaction Database)TMEM61
DoCM (Curated mutations)TMEM61
CIViC (Clinical Interpretations of Variants in Cancer)TMEM61
Cancer3DTMEM61
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM61
MedgenTMEM61
Genetic Testing Registry TMEM61
NextProtQ8N0U2 [Medical]
GENETestsTMEM61
Target ValidationTMEM61
Huge Navigator TMEM61 [HugePedia]
ClinGenTMEM61
Clinical trials, drugs, therapy
MyCancerGenomeTMEM61
Protein Interactions : CTDTMEM61
Pharm GKB GenePA142670774
PharosQ8N0U2
Clinical trialTMEM61
Miscellaneous
canSAR (ICR)TMEM61
HarmonizomeTMEM61
DataMed IndexTMEM61
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM61
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:26:18 CEST 2021

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