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TMEM65 (transmembrane protein 65)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM65
LocusID (NCBI) 157378
Atlas_Id 74969
Location 8q24.13  [Link to chromosome band 8q24]
Location_base_pair Starts at 124310918 and ends at 124372699 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
RB1 (13q14.2) / TMEM65 (8q24.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM65   25203
Cards
Entrez_Gene (NCBI)TMEM65    transmembrane protein 65
Aliases
GeneCards (Weizmann)TMEM65
Ensembl hg19 (Hinxton)ENSG00000164983 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164983 [Gene_View]  ENSG00000164983 [Sequence]  chr8:124310918-124372699 [Contig_View]  TMEM65 [Vega]
ICGC DataPortalENSG00000164983
TCGA cBioPortalTMEM65
AceView (NCBI)TMEM65
Genatlas (Paris)TMEM65
SOURCE (Princeton)TMEM65
Genetics Home Reference (NIH)TMEM65
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM65  -     chr8:124310918-124372699 -  8q24.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM65  -     8q24.13   [Description]    (hg19-Feb_2009)
GoldenPathTMEM65 - 8q24.13 [CytoView hg19]  TMEM65 - 8q24.13 [CytoView hg38]
ImmunoBaseENSG00000164983
Genome Data Viewer NCBITMEM65 [Mapview hg19]  
OMIM616609   
Gene and transcription
Genbank (Entrez)AK095104 AW300050 BC017881 BC032396 BC041379
RefSeq transcript (Entrez)NM_194291
Consensus coding sequences : CCDS (NCBI)TMEM65
Gene ExpressionTMEM65 [ NCBI-GEO ]   TMEM65 [ EBI - ARRAY_EXPRESS ]   TMEM65 [ SEEK ]   TMEM65 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM65 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM65 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)157378
GTEX Portal (Tissue expression)TMEM65
Human Protein AtlasENSG00000164983-TMEM65 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PI78   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6PI78  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6PI78
PhosPhoSitePlusQ6PI78
Domains : Interpro (EBI)TMEM65   
Domain families : Pfam (Sanger)TMEM65 (PF10507)   
Domain families : Pfam (NCBI)pfam10507   
Conserved Domain (NCBI)TMEM65
SuperfamilyQ6PI78
AlphaFold pdb e-kbQ6PI78   
Human Protein Atlas [tissue]ENSG00000164983-TMEM65 [tissue]
HPRD14102
Protein Interaction databases
DIP (DOE-UCLA)Q6PI78
IntAct (EBI)Q6PI78
BioGRIDTMEM65
STRING (EMBL)TMEM65
ZODIACTMEM65
Ontologies - Pathways
QuickGOQ6PI78
Ontology : AmiGOcardiac ventricle development  protein binding  mitochondrial inner membrane  plasma membrane  intercalated disc  integral component of membrane  regulation of cardiac conduction  
Ontology : EGO-EBIcardiac ventricle development  protein binding  mitochondrial inner membrane  plasma membrane  intercalated disc  integral component of membrane  regulation of cardiac conduction  
NDEx NetworkTMEM65
Atlas of Cancer Signalling NetworkTMEM65
Wikipedia pathwaysTMEM65
Orthology - Evolution
OrthoDB157378
GeneTree (enSembl)ENSG00000164983
Phylogenetic Trees/Animal Genes : TreeFamTMEM65
Homologs : HomoloGeneTMEM65
Homology/Alignments : Family Browser (UCSC)TMEM65
Gene fusions - Rearrangements
Fusion : QuiverTMEM65
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM65 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM65
dbVarTMEM65
ClinVarTMEM65
MonarchTMEM65
1000_GenomesTMEM65 
Exome Variant ServerTMEM65
GNOMAD BrowserENSG00000164983
Varsome BrowserTMEM65
ACMGTMEM65 variants
VarityQ6PI78
Genomic Variants (DGV)TMEM65 [DGVbeta]
DECIPHERTMEM65 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM65 
Mutations
ICGC Data PortalTMEM65 
TCGA Data PortalTMEM65 
Broad Tumor PortalTMEM65
OASIS PortalTMEM65 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM65  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM65
Mutations and Diseases : HGMDTMEM65
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM65
DgiDB (Drug Gene Interaction Database)TMEM65
DoCM (Curated mutations)TMEM65
CIViC (Clinical Interpretations of Variants in Cancer)TMEM65
Cancer3DTMEM65
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616609   
Orphanet
DisGeNETTMEM65
MedgenTMEM65
Genetic Testing Registry TMEM65
NextProtQ6PI78 [Medical]
GENETestsTMEM65
Target ValidationTMEM65
Huge Navigator TMEM65 [HugePedia]
ClinGenTMEM65
Clinical trials, drugs, therapy
MyCancerGenomeTMEM65
Protein Interactions : CTDTMEM65
Pharm GKB GenePA142670778
PharosQ6PI78
Clinical trialTMEM65
Miscellaneous
canSAR (ICR)TMEM65
HarmonizomeTMEM65
DataMed IndexTMEM65
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM65
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:18 CEST 2021

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