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TMEM68 (transmembrane protein 68)

Identity

Alias_symbol (synonym)FLJ32370
Other alias-
HGNC (Hugo) TMEM68
LocusID (NCBI) 137695
Atlas_Id 74970
Location 8q12.1  [Link to chromosome band 8q12]
Location_base_pair Starts at 56651303 and ends at 56676539 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ERLIN2 (8p11.23) / TMEM68 (8q12.1)TMEM68 (8q12.1) / ERCC3 (2q14.3)TMEM68 (8q12.1) / PEX5L (3q26.33)
TMEM68 (8q12.1) / TMEM68 (8q12.1)TMEM68 (8q12.1) / ZNF821 (16q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM68   26510
Cards
Entrez_Gene (NCBI)TMEM68  137695  transmembrane protein 68
Aliases
GeneCards (Weizmann)TMEM68
Ensembl hg19 (Hinxton)ENSG00000167904 [Gene_View]  chr8:56651303-56676539 [Contig_View]  TMEM68 [Vega]
Ensembl hg38 (Hinxton)ENSG00000167904 [Gene_View]  chr8:56651303-56676539 [Contig_View]  TMEM68 [Vega]
ICGC DataPortalENSG00000167904
TCGA cBioPortalTMEM68
AceView (NCBI)TMEM68
Genatlas (Paris)TMEM68
WikiGenes137695
SOURCE (Princeton)TMEM68
Genetics Home Reference (NIH)TMEM68
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM68  -     chr8:56651303-56676539 -  8q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM68  -     8q12.1   [Description]    (hg38-Dec_2013)
EnsemblTMEM68 - 8q12.1 [CytoView hg19]  TMEM68 - 8q12.1 [CytoView hg38]
Mapping of homologs : NCBITMEM68 [Mapview hg19]  TMEM68 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF147306 AK056932 AK308247 AL832935 BC020835
RefSeq transcript (Entrez)NM_001286657 NM_001286660 NM_001286661 NM_152417
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008183 NW_004929339
Consensus coding sequences : CCDS (NCBI)TMEM68
Cluster EST : UnigeneHs.420076 [ NCBI ]
CGAP (NCI)Hs.420076
Alternative Splicing GalleryENSG00000167904
Gene ExpressionTMEM68 [ NCBI-GEO ]   TMEM68 [ EBI - ARRAY_EXPRESS ]   TMEM68 [ SEEK ]   TMEM68 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM68 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)137695
GTEX Portal (Tissue expression)TMEM68
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96MH6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96MH6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96MH6
Splice isoforms : SwissVarQ96MH6
PhosPhoSitePlusQ96MH6
Domains : Interpro (EBI)Plipid/glycerol_acylTrfase   
Domain families : Pfam (Sanger)Acyltransferase (PF01553)   
Domain families : Pfam (NCBI)pfam01553   
Domain families : Smart (EMBL)PlsC (SM00563)  
Conserved Domain (NCBI)TMEM68
DMDM Disease mutations137695
Blocks (Seattle)TMEM68
SuperfamilyQ96MH6
Human Protein AtlasENSG00000167904
Peptide AtlasQ96MH6
HPRD08128
IPIIPI00470401   IPI00065510   IPI00788760   IPI00984036   IPI00978960   IPI00978324   IPI00983757   IPI00974120   IPI01010787   IPI00977539   IPI00982122   IPI00974427   IPI00978460   IPI00975651   
Protein Interaction databases
DIP (DOE-UCLA)Q96MH6
IntAct (EBI)Q96MH6
FunCoupENSG00000167904
BioGRIDTMEM68
STRING (EMBL)TMEM68
ZODIACTMEM68
Ontologies - Pathways
QuickGOQ96MH6
Ontology : AmiGOmetabolic process  integral component of membrane  transferase activity, transferring acyl groups  
Ontology : EGO-EBImetabolic process  integral component of membrane  transferase activity, transferring acyl groups  
NDEx NetworkTMEM68
Atlas of Cancer Signalling NetworkTMEM68
Wikipedia pathwaysTMEM68
Orthology - Evolution
OrthoDB137695
GeneTree (enSembl)ENSG00000167904
Phylogenetic Trees/Animal Genes : TreeFamTMEM68
HOVERGENQ96MH6
HOGENOMQ96MH6
Homologs : HomoloGeneTMEM68
Homology/Alignments : Family Browser (UCSC)TMEM68
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM68 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM68
dbVarTMEM68
ClinVarTMEM68
1000_GenomesTMEM68 
Exome Variant ServerTMEM68
ExAC (Exome Aggregation Consortium)TMEM68 (select the gene name)
Genetic variants : HAPMAP137695
Genomic Variants (DGV)TMEM68 [DGVbeta]
DECIPHER (Syndromes)8:56651303-56676539  ENSG00000167904
CONAN: Copy Number AnalysisTMEM68 
Mutations
ICGC Data PortalTMEM68 
TCGA Data PortalTMEM68 
Broad Tumor PortalTMEM68
OASIS PortalTMEM68 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM68  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM68
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM68
DgiDB (Drug Gene Interaction Database)TMEM68
DoCM (Curated mutations)TMEM68 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM68 (select a term)
intoGenTMEM68
Cancer3DTMEM68(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM68
Genetic Testing Registry TMEM68
NextProtQ96MH6 [Medical]
TSGene137695
GENETestsTMEM68
Huge Navigator TMEM68 [HugePedia]
snp3D : Map Gene to Disease137695
BioCentury BCIQTMEM68
ClinGenTMEM68
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD137695
Chemical/Pharm GKB GenePA142670781
Clinical trialTMEM68
Miscellaneous
canSAR (ICR)TMEM68 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM68
EVEXTMEM68
GoPubMedTMEM68
iHOPTMEM68
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:49:03 CET 2017

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