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TMEM70 (transmembrane protein 70)

Identity

Alias_symbol (synonym)FLJ20533
Other aliasMC5DN2
HGNC (Hugo) TMEM70
LocusID (NCBI) 54968
Atlas_Id 74972
Location 8q21.11  [Link to chromosome band 8q21]
Location_base_pair Starts at 73976142 and ends at 73982783 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM70   26050
Cards
Entrez_Gene (NCBI)TMEM70  54968  transmembrane protein 70
AliasesMC5DN2
GeneCards (Weizmann)TMEM70
Ensembl hg19 (Hinxton)ENSG00000175606 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175606 [Gene_View]  chr8:73976142-73982783 [Contig_View]  TMEM70 [Vega]
ICGC DataPortalENSG00000175606
TCGA cBioPortalTMEM70
AceView (NCBI)TMEM70
Genatlas (Paris)TMEM70
WikiGenes54968
SOURCE (Princeton)TMEM70
Genetics Home Reference (NIH)TMEM70
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM70  -     chr8:73976142-73982783 +  8q21.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM70  -     8q21.11   [Description]    (hg19-Feb_2009)
EnsemblTMEM70 - 8q21.11 [CytoView hg19]  TMEM70 - 8q21.11 [CytoView hg38]
Mapping of homologs : NCBITMEM70 [Mapview hg19]  TMEM70 [Mapview hg38]
OMIM612418   614052   
Gene and transcription
Genbank (Entrez)AI800622 AK000540 AK225531 AK225536 BC002748
RefSeq transcript (Entrez)NM_001040613 NM_017866
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM70
Cluster EST : UnigeneHs.106650 [ NCBI ]
CGAP (NCI)Hs.106650
Alternative Splicing GalleryENSG00000175606
Gene ExpressionTMEM70 [ NCBI-GEO ]   TMEM70 [ EBI - ARRAY_EXPRESS ]   TMEM70 [ SEEK ]   TMEM70 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM70 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54968
GTEX Portal (Tissue expression)TMEM70
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BUB7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BUB7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BUB7
Splice isoforms : SwissVarQ9BUB7
PhosPhoSitePlusQ9BUB7
Domains : Interpro (EBI)TMEM70   
Domain families : Pfam (Sanger)TMEM70 (PF06979)   
Domain families : Pfam (NCBI)pfam06979   
Conserved Domain (NCBI)TMEM70
DMDM Disease mutations54968
Blocks (Seattle)TMEM70
SuperfamilyQ9BUB7
Human Protein AtlasENSG00000175606
Peptide AtlasQ9BUB7
HPRD07923
IPIIPI00106966   IPI00787239   IPI00759624   IPI01010213   
Protein Interaction databases
DIP (DOE-UCLA)Q9BUB7
IntAct (EBI)Q9BUB7
FunCoupENSG00000175606
BioGRIDTMEM70
STRING (EMBL)TMEM70
ZODIACTMEM70
Ontologies - Pathways
QuickGOQ9BUB7
Ontology : AmiGOmolecular_function  nucleoplasm  mitochondrion  mitochondrial inner membrane  integral component of mitochondrial membrane  mitochondrial proton-transporting ATP synthase complex assembly  
Ontology : EGO-EBImolecular_function  nucleoplasm  mitochondrion  mitochondrial inner membrane  integral component of mitochondrial membrane  mitochondrial proton-transporting ATP synthase complex assembly  
NDEx NetworkTMEM70
Atlas of Cancer Signalling NetworkTMEM70
Wikipedia pathwaysTMEM70
Orthology - Evolution
OrthoDB54968
GeneTree (enSembl)ENSG00000175606
Phylogenetic Trees/Animal Genes : TreeFamTMEM70
HOVERGENQ9BUB7
HOGENOMQ9BUB7
Homologs : HomoloGeneTMEM70
Homology/Alignments : Family Browser (UCSC)TMEM70
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM70 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM70
dbVarTMEM70
ClinVarTMEM70
1000_GenomesTMEM70 
Exome Variant ServerTMEM70
ExAC (Exome Aggregation Consortium)TMEM70 (select the gene name)
Genetic variants : HAPMAP54968
Genomic Variants (DGV)TMEM70 [DGVbeta]
DECIPHERTMEM70 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM70 
Mutations
ICGC Data PortalTMEM70 
TCGA Data PortalTMEM70 
Broad Tumor PortalTMEM70
OASIS PortalTMEM70 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM70  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM70
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TMEM70
DgiDB (Drug Gene Interaction Database)TMEM70
DoCM (Curated mutations)TMEM70 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM70 (select a term)
intoGenTMEM70
Cancer3DTMEM70(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612418    614052   
Orphanet5015   
MedgenTMEM70
Genetic Testing Registry TMEM70
NextProtQ9BUB7 [Medical]
TSGene54968
GENETestsTMEM70
Target ValidationTMEM70
Huge Navigator TMEM70 [HugePedia]
snp3D : Map Gene to Disease54968
BioCentury BCIQTMEM70
ClinGenTMEM70
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54968
Chemical/Pharm GKB GenePA142670783
Clinical trialTMEM70
Miscellaneous
canSAR (ICR)TMEM70 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM70
EVEXTMEM70
GoPubMedTMEM70
iHOPTMEM70
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:42:05 CEST 2017

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