Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TMEM72-AS1 (TMEM72 antisense RNA 1)

Identity

Alias_namesTMEM72 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) TMEM72-AS1
LocusID (NCBI) 220980
Atlas_Id 74975
Location 10q11.21  [Link to chromosome band 10q11]
Location_base_pair Starts at 44811024 and ends at 44959689 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM72-AS1   27349
Cards
Entrez_Gene (NCBI)TMEM72-AS1  220980  TMEM72 antisense RNA 1
Aliases
GeneCards (Weizmann)TMEM72-AS1
Ensembl hg19 (Hinxton)ENSG00000224812 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224812 [Gene_View]  chr10:44811024-44959689 [Contig_View]  TMEM72-AS1 [Vega]
ICGC DataPortalENSG00000224812
TCGA cBioPortalTMEM72-AS1
AceView (NCBI)TMEM72-AS1
Genatlas (Paris)TMEM72-AS1
WikiGenes220980
SOURCE (Princeton)TMEM72-AS1
Genetics Home Reference (NIH)TMEM72-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM72-AS1  -     chr10:44811024-44959689 -  10q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM72-AS1  -     10q11.21   [Description]    (hg19-Feb_2009)
EnsemblTMEM72-AS1 - 10q11.21 [CytoView hg19]  TMEM72-AS1 - 10q11.21 [CytoView hg38]
Mapping of homologs : NCBITMEM72-AS1 [Mapview hg19]  TMEM72-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056518 DB298676
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM72-AS1
Cluster EST : UnigeneHs.568801 [ NCBI ]
CGAP (NCI)Hs.568801
Alternative Splicing GalleryENSG00000224812
Gene ExpressionTMEM72-AS1 [ NCBI-GEO ]   TMEM72-AS1 [ EBI - ARRAY_EXPRESS ]   TMEM72-AS1 [ SEEK ]   TMEM72-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM72-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)220980
GTEX Portal (Tissue expression)TMEM72-AS1
Human Protein AtlasENSG00000224812-TMEM72-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM72-AS1
DMDM Disease mutations220980
Blocks (Seattle)TMEM72-AS1
Human Protein Atlas [tissue]ENSG00000224812-TMEM72-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000224812
BioGRIDTMEM72-AS1
STRING (EMBL)TMEM72-AS1
ZODIACTMEM72-AS1
Ontologies - Pathways
Huge Navigator TMEM72-AS1 [HugePedia]
snp3D : Map Gene to Disease220980
BioCentury BCIQTMEM72-AS1
ClinGenTMEM72-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD220980
Clinical trialTMEM72-AS1
Miscellaneous
canSAR (ICR)TMEM72-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM72-AS1
EVEXTMEM72-AS1
GoPubMedTMEM72-AS1
iHOPTMEM72-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:22:44 CET 2017

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