Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMEM75 (transmembrane protein 75)

Identity

Alias_symbol (synonym)FLJ36105
Other alias-
HGNC (Hugo) TMEM75
LocusID (NCBI) 641384
Atlas_Id 74977
Location 8q24.21  [Link to chromosome band 8q24]
Location_base_pair Starts at 127946559 and ends at 127948723 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM75   32295
Cards
Entrez_Gene (NCBI)TMEM75  641384  transmembrane protein 75
Aliases
GeneCards (Weizmann)TMEM75
Ensembl hg19 (Hinxton)ENSG00000280055 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280055 [Gene_View]  chr8:127946559-127948723 [Contig_View]  TMEM75 [Vega]
ICGC DataPortalENSG00000280055
TCGA cBioPortalTMEM75
AceView (NCBI)TMEM75
Genatlas (Paris)TMEM75
WikiGenes641384
SOURCE (Princeton)TMEM75
Genetics Home Reference (NIH)TMEM75
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM75  -     chr8:127946559-127948723 -  8q24.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM75  -     8q24.21   [Description]    (hg19-Feb_2009)
EnsemblTMEM75 - 8q24.21 [CytoView hg19]  TMEM75 - 8q24.21 [CytoView hg38]
Mapping of homologs : NCBITMEM75 [Mapview hg19]  TMEM75 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093424 AX748117 BC137383 BC137385
RefSeq transcript (Entrez)NM_001037234
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM75
Cluster EST : UnigeneHs.629674 [ NCBI ]
CGAP (NCI)Hs.629674
Alternative Splicing GalleryENSG00000280055
Gene ExpressionTMEM75 [ NCBI-GEO ]   TMEM75 [ EBI - ARRAY_EXPRESS ]   TMEM75 [ SEEK ]   TMEM75 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM75 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)641384
GTEX Portal (Tissue expression)TMEM75
Human Protein AtlasENSG00000280055-TMEM75 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N9X5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N9X5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N9X5
Splice isoforms : SwissVarQ8N9X5
PhosPhoSitePlusQ8N9X5
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM75
DMDM Disease mutations641384
Blocks (Seattle)TMEM75
SuperfamilyQ8N9X5
Human Protein Atlas [tissue]ENSG00000280055-TMEM75 [tissue]
Peptide AtlasQ8N9X5
IPIIPI00167838   
Protein Interaction databases
DIP (DOE-UCLA)Q8N9X5
IntAct (EBI)Q8N9X5
FunCoupENSG00000280055
BioGRIDTMEM75
STRING (EMBL)TMEM75
ZODIACTMEM75
Ontologies - Pathways
QuickGOQ8N9X5
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM75
Atlas of Cancer Signalling NetworkTMEM75
Wikipedia pathwaysTMEM75
Orthology - Evolution
OrthoDB641384
GeneTree (enSembl)ENSG00000280055
Phylogenetic Trees/Animal Genes : TreeFamTMEM75
HOVERGENQ8N9X5
HOGENOMQ8N9X5
Homologs : HomoloGeneTMEM75
Homology/Alignments : Family Browser (UCSC)TMEM75
Gene fusions - Rearrangements
Tumor Fusion PortalTMEM75
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM75 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM75
dbVarTMEM75
ClinVarTMEM75
1000_GenomesTMEM75 
Exome Variant ServerTMEM75
ExAC (Exome Aggregation Consortium)ENSG00000280055
GNOMAD BrowserENSG00000280055
Genetic variants : HAPMAP641384
Genomic Variants (DGV)TMEM75 [DGVbeta]
DECIPHERTMEM75 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM75 
Mutations
ICGC Data PortalTMEM75 
TCGA Data PortalTMEM75 
Broad Tumor PortalTMEM75
OASIS PortalTMEM75 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM75  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM75
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch TMEM75
DgiDB (Drug Gene Interaction Database)TMEM75
DoCM (Curated mutations)TMEM75 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM75 (select a term)
intoGenTMEM75
Cancer3DTMEM75(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM75
MedgenTMEM75
Genetic Testing Registry TMEM75
NextProtQ8N9X5 [Medical]
TSGene641384
GENETestsTMEM75
Target ValidationTMEM75
Huge Navigator TMEM75 [HugePedia]
snp3D : Map Gene to Disease641384
BioCentury BCIQTMEM75
ClinGenTMEM75
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD641384
Chemical/Pharm GKB GenePA142670786
Clinical trialTMEM75
Miscellaneous
canSAR (ICR)TMEM75 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM75
EVEXTMEM75
GoPubMedTMEM75
iHOPTMEM75
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:19:07 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.