Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TMEM81 (transmembrane protein 81)

Identity

Alias_symbol (synonym)UNQ2788
MGC75217
HC3107
KVLA2788
Other alias
HGNC (Hugo) TMEM81
LocusID (NCBI) 388730
Atlas_Id 74981
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 205083129 and ends at 205084460 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM81   32349
Cards
Entrez_Gene (NCBI)TMEM81  388730  transmembrane protein 81
AliasesHC3107; KVLA2788; UNQ2788
GeneCards (Weizmann)TMEM81
Ensembl hg19 (Hinxton)ENSG00000174529 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174529 [Gene_View]  chr1:205083129-205084460 [Contig_View]  TMEM81 [Vega]
ICGC DataPortalENSG00000174529
TCGA cBioPortalTMEM81
AceView (NCBI)TMEM81
Genatlas (Paris)TMEM81
WikiGenes388730
SOURCE (Princeton)TMEM81
Genetics Home Reference (NIH)TMEM81
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM81  -     chr1:205083129-205084460 -  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM81  -     1q32.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM81 - 1q32.1 [CytoView hg19]  TMEM81 - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBITMEM81 [Mapview hg19]  TMEM81 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK303432 AY359081 BC061592
RefSeq transcript (Entrez)NM_203376
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM81
Cluster EST : UnigeneHs.146928 [ NCBI ]
CGAP (NCI)Hs.146928
Alternative Splicing GalleryENSG00000174529
Gene ExpressionTMEM81 [ NCBI-GEO ]   TMEM81 [ EBI - ARRAY_EXPRESS ]   TMEM81 [ SEEK ]   TMEM81 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM81 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388730
GTEX Portal (Tissue expression)TMEM81
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P7N7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P7N7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P7N7
Splice isoforms : SwissVarQ6P7N7
PhosPhoSitePlusQ6P7N7
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM81
DMDM Disease mutations388730
Blocks (Seattle)TMEM81
SuperfamilyQ6P7N7
Human Protein AtlasENSG00000174529
Peptide AtlasQ6P7N7
HPRD14205
IPIIPI00258500   
Protein Interaction databases
DIP (DOE-UCLA)Q6P7N7
IntAct (EBI)Q6P7N7
FunCoupENSG00000174529
BioGRIDTMEM81
STRING (EMBL)TMEM81
ZODIACTMEM81
Ontologies - Pathways
QuickGOQ6P7N7
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM81
Atlas of Cancer Signalling NetworkTMEM81
Wikipedia pathwaysTMEM81
Orthology - Evolution
OrthoDB388730
GeneTree (enSembl)ENSG00000174529
Phylogenetic Trees/Animal Genes : TreeFamTMEM81
HOVERGENQ6P7N7
HOGENOMQ6P7N7
Homologs : HomoloGeneTMEM81
Homology/Alignments : Family Browser (UCSC)TMEM81
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM81 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM81
dbVarTMEM81
ClinVarTMEM81
1000_GenomesTMEM81 
Exome Variant ServerTMEM81
ExAC (Exome Aggregation Consortium)TMEM81 (select the gene name)
Genetic variants : HAPMAP388730
Genomic Variants (DGV)TMEM81 [DGVbeta]
DECIPHERTMEM81 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM81 
Mutations
ICGC Data PortalTMEM81 
TCGA Data PortalTMEM81 
Broad Tumor PortalTMEM81
OASIS PortalTMEM81 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM81  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM81
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM81
DgiDB (Drug Gene Interaction Database)TMEM81
DoCM (Curated mutations)TMEM81 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM81 (select a term)
intoGenTMEM81
Cancer3DTMEM81(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM81
Genetic Testing Registry TMEM81
NextProtQ6P7N7 [Medical]
TSGene388730
GENETestsTMEM81
Target ValidationTMEM81
Huge Navigator TMEM81 [HugePedia]
snp3D : Map Gene to Disease388730
BioCentury BCIQTMEM81
ClinGenTMEM81
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388730
Chemical/Pharm GKB GenePA143485633
Clinical trialTMEM81
Miscellaneous
canSAR (ICR)TMEM81 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM81
EVEXTMEM81
GoPubMedTMEM81
iHOPTMEM81
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:42:06 CEST 2017

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