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TMEM91 (transmembrane protein 91)

Identity

Alias_symbol (synonym)FLJ27310
IFITMD6
Other aliasDSPC3
HGNC (Hugo) TMEM91
LocusID (NCBI) 641649
Atlas_Id 74992
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 41377264 and ends at 41384082 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BCKDHA (19q13.2) / TMEM91 (19q13.2)JA040725 () / TMEM91 (19q13.2)PRPS1 (Xq22.3) / TMEM91 (19q13.2)
TMEM91 (19q13.2) / DTX4 (11q12.1)TMEM91 (19q13.2) / PI4KAP2 (22q11.21)TMEM91 (19q13.2) / TGFB1 (19q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM91   32393
Cards
Entrez_Gene (NCBI)TMEM91  641649  transmembrane protein 91
AliasesDSPC3; IFITMD6
GeneCards (Weizmann)TMEM91
Ensembl hg19 (Hinxton)ENSG00000142046 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000142046 [Gene_View]  chr19:41377264-41384082 [Contig_View]  TMEM91 [Vega]
ICGC DataPortalENSG00000142046
TCGA cBioPortalTMEM91
AceView (NCBI)TMEM91
Genatlas (Paris)TMEM91
WikiGenes641649
SOURCE (Princeton)TMEM91
Genetics Home Reference (NIH)TMEM91
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM91  -     chr19:41377264-41384082 +  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM91  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM91 - 19q13.2 [CytoView hg19]  TMEM91 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBITMEM91 [Mapview hg19]  TMEM91 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI214374 AI277187 AK130820 AL833095 BC063705
RefSeq transcript (Entrez)NM_001042595 NM_001098821 NM_001098822 NM_001098823 NM_001098824 NM_001098825
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM91
Cluster EST : UnigeneHs.709417 [ NCBI ]
CGAP (NCI)Hs.709417
Alternative Splicing GalleryENSG00000142046
Gene ExpressionTMEM91 [ NCBI-GEO ]   TMEM91 [ EBI - ARRAY_EXPRESS ]   TMEM91 [ SEEK ]   TMEM91 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM91 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)641649
GTEX Portal (Tissue expression)TMEM91
Human Protein AtlasENSG00000142046-TMEM91 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZNR0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZNR0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZNR0
Splice isoforms : SwissVarQ6ZNR0
PhosPhoSitePlusQ6ZNR0
Domains : Interpro (EBI)CD225/Dispanin_fam   
Domain families : Pfam (Sanger)CD225 (PF04505)   
Domain families : Pfam (NCBI)pfam04505   
Conserved Domain (NCBI)TMEM91
DMDM Disease mutations641649
Blocks (Seattle)TMEM91
SuperfamilyQ6ZNR0
Human Protein Atlas [tissue]ENSG00000142046-TMEM91 [tissue]
Peptide AtlasQ6ZNR0
IPIIPI00412704   IPI01013734   IPI00856056   IPI00853427   IPI00853620   IPI01013965   IPI01011036   IPI00440500   IPI01012089   IPI01012553   IPI01009388   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZNR0
IntAct (EBI)Q6ZNR0
FunCoupENSG00000142046
BioGRIDTMEM91
STRING (EMBL)TMEM91
ZODIACTMEM91
Ontologies - Pathways
QuickGOQ6ZNR0
Ontology : AmiGOhematopoietic progenitor cell differentiation  molecular_function  cellular_component  biological_process  response to biotic stimulus  integral component of membrane  
Ontology : EGO-EBIhematopoietic progenitor cell differentiation  molecular_function  cellular_component  biological_process  response to biotic stimulus  integral component of membrane  
NDEx NetworkTMEM91
Atlas of Cancer Signalling NetworkTMEM91
Wikipedia pathwaysTMEM91
Orthology - Evolution
OrthoDB641649
GeneTree (enSembl)ENSG00000142046
Phylogenetic Trees/Animal Genes : TreeFamTMEM91
HOVERGENQ6ZNR0
HOGENOMQ6ZNR0
Homologs : HomoloGeneTMEM91
Homology/Alignments : Family Browser (UCSC)TMEM91
Gene fusions - Rearrangements
Fusion: Tumor Portal TMEM91
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM91 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM91
dbVarTMEM91
ClinVarTMEM91
1000_GenomesTMEM91 
Exome Variant ServerTMEM91
ExAC (Exome Aggregation Consortium)ENSG00000142046
GNOMAD BrowserENSG00000142046
Genetic variants : HAPMAP641649
Genomic Variants (DGV)TMEM91 [DGVbeta]
DECIPHERTMEM91 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM91 
Mutations
ICGC Data PortalTMEM91 
TCGA Data PortalTMEM91 
Broad Tumor PortalTMEM91
OASIS PortalTMEM91 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM91  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM91
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TMEM91
DgiDB (Drug Gene Interaction Database)TMEM91
DoCM (Curated mutations)TMEM91 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM91 (select a term)
intoGenTMEM91
Cancer3DTMEM91(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM91
Genetic Testing Registry TMEM91
NextProtQ6ZNR0 [Medical]
TSGene641649
GENETestsTMEM91
Target ValidationTMEM91
Huge Navigator TMEM91 [HugePedia]
snp3D : Map Gene to Disease641649
BioCentury BCIQTMEM91
ClinGenTMEM91
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD641649
Chemical/Pharm GKB GenePA142670743
Clinical trialTMEM91
Miscellaneous
canSAR (ICR)TMEM91 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM91
EVEXTMEM91
GoPubMedTMEM91
iHOPTMEM91
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:33:22 CET 2017

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