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TMEM92 (transmembrane protein 92)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM92
HGNC Alias symbFLJ33318
LocusID (NCBI) 162461
Atlas_Id 74993
Location 17q21.33  [Link to chromosome band 17q21]
Location_base_pair Starts at 50274466 and ends at 50281485 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM92 (17q21.33) / TMEM92 (17q21.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM92   26579
Cards
Entrez_Gene (NCBI)TMEM92    transmembrane protein 92
Aliases
GeneCards (Weizmann)TMEM92
Ensembl hg19 (Hinxton)ENSG00000167105 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167105 [Gene_View]  ENSG00000167105 [Sequence]  chr17:50274466-50281485 [Contig_View]  TMEM92 [Vega]
ICGC DataPortalENSG00000167105
TCGA cBioPortalTMEM92
AceView (NCBI)TMEM92
Genatlas (Paris)TMEM92
SOURCE (Princeton)TMEM92
Genetics Home Reference (NIH)TMEM92
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM92  -     chr17:50274466-50281485 +  17q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM92  -     17q21.33   [Description]    (hg19-Feb_2009)
GoldenPathTMEM92 - 17q21.33 [CytoView hg19]  TMEM92 - 17q21.33 [CytoView hg38]
ImmunoBaseENSG00000167105
Genome Data Viewer NCBITMEM92 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK090637 AW293202 AY358204 BC064507 DB072318
RefSeq transcript (Entrez)NM_001168215 NM_153229
Consensus coding sequences : CCDS (NCBI)TMEM92
Gene ExpressionTMEM92 [ NCBI-GEO ]   TMEM92 [ EBI - ARRAY_EXPRESS ]   TMEM92 [ SEEK ]   TMEM92 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM92 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM92 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)162461
GTEX Portal (Tissue expression)TMEM92
Human Protein AtlasENSG00000167105-TMEM92 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXU6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXU6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXU6
PhosPhoSitePlusQ6UXU6
Domains : Interpro (EBI)WBP1-like   
Domain families : Pfam (Sanger)WBP-1 (PF11669)   
Domain families : Pfam (NCBI)pfam11669   
Conserved Domain (NCBI)TMEM92
SuperfamilyQ6UXU6
AlphaFold pdb e-kbQ6UXU6   
Human Protein Atlas [tissue]ENSG00000167105-TMEM92 [tissue]
HPRD08743
Protein Interaction databases
DIP (DOE-UCLA)Q6UXU6
IntAct (EBI)Q6UXU6
BioGRIDTMEM92
STRING (EMBL)TMEM92
ZODIACTMEM92
Ontologies - Pathways
QuickGOQ6UXU6
Ontology : AmiGOprotein binding  nucleoplasm  nucleoplasm  integral component of membrane  
Ontology : EGO-EBIprotein binding  nucleoplasm  nucleoplasm  integral component of membrane  
NDEx NetworkTMEM92
Atlas of Cancer Signalling NetworkTMEM92
Wikipedia pathwaysTMEM92
Orthology - Evolution
OrthoDB162461
GeneTree (enSembl)ENSG00000167105
Phylogenetic Trees/Animal Genes : TreeFamTMEM92
Homologs : HomoloGeneTMEM92
Homology/Alignments : Family Browser (UCSC)TMEM92
Gene fusions - Rearrangements
Fusion : QuiverTMEM92
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM92 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM92
dbVarTMEM92
ClinVarTMEM92
MonarchTMEM92
1000_GenomesTMEM92 
Exome Variant ServerTMEM92
GNOMAD BrowserENSG00000167105
Varsome BrowserTMEM92
ACMGTMEM92 variants
VarityQ6UXU6
Genomic Variants (DGV)TMEM92 [DGVbeta]
DECIPHERTMEM92 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM92 
Mutations
ICGC Data PortalTMEM92 
TCGA Data PortalTMEM92 
Broad Tumor PortalTMEM92
OASIS PortalTMEM92 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM92  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM92
Mutations and Diseases : HGMDTMEM92
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM92
DgiDB (Drug Gene Interaction Database)TMEM92
DoCM (Curated mutations)TMEM92
CIViC (Clinical Interpretations of Variants in Cancer)TMEM92
Cancer3DTMEM92
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM92
MedgenTMEM92
Genetic Testing Registry TMEM92
NextProtQ6UXU6 [Medical]
GENETestsTMEM92
Target ValidationTMEM92
Huge Navigator TMEM92 [HugePedia]
ClinGenTMEM92
Clinical trials, drugs, therapy
MyCancerGenomeTMEM92
Protein Interactions : CTDTMEM92
Pharm GKB GenePA142670744
PharosQ6UXU6
Clinical trialTMEM92
Miscellaneous
canSAR (ICR)TMEM92
HarmonizomeTMEM92
DataMed IndexTMEM92
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM92
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:23 CEST 2021

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