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TMEM94 (transmembrane protein 94)

Identity

Alias_namesKIAA0195
KIAA0195
Other alias
HGNC (Hugo) TMEM94
LocusID (NCBI) 9772
Atlas_Id 78025
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 75476498 and ends at 75500452 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FAM63B (15q21.3) / TMEM94 (17q25.1)GPSM1 (9q34.3) / TMEM94 (17q25.1)TMEM94 (17q25.1) / ICT1 (17q25.1)
TMEM94 (17q25.1) / KIAA1324L (7q21.12)TMEM94 (17q25.1) / KIF13A (6p22.3)TMEM94 (17q25.1) / NUP85 (17q25.1)
TMEM94 (17q25.1) / PLEK2 (14q23.3)TMEM94 (17q25.1) / TMEM94 (17q25.1)TMEM94 (17q25.1) / TTYH2 (17q25.1)
TMEM94 (17q25.1) / ZFP90 (16q22.1)TNFRSF12A (16p13.3) / TMEM94 (17q25.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM94   28983
Cards
Entrez_Gene (NCBI)TMEM94  9772  transmembrane protein 94
AliasesKIAA0195
GeneCards (Weizmann)TMEM94
Ensembl hg19 (Hinxton)ENSG00000177728 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177728 [Gene_View]  chr17:75476498-75500452 [Contig_View]  TMEM94 [Vega]
ICGC DataPortalENSG00000177728
TCGA cBioPortalTMEM94
AceView (NCBI)TMEM94
Genatlas (Paris)TMEM94
WikiGenes9772
SOURCE (Princeton)TMEM94
Genetics Home Reference (NIH)TMEM94
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM94  -     chr17:75476498-75500452 +  17q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM94  -     17q25.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM94 - 17q25.1 [CytoView hg19]  TMEM94 - 17q25.1 [CytoView hg38]
Mapping of homologs : NCBITMEM94 [Mapview hg19]  TMEM94 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF070545 AK094864 AK128508 AK294526 AK304819
RefSeq transcript (Entrez)NM_001321148 NM_001321149 NM_001351202 NM_001351203 NM_014738
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM94
Cluster EST : UnigeneHs.514474 [ NCBI ]
CGAP (NCI)Hs.514474
Alternative Splicing GalleryENSG00000177728
Gene ExpressionTMEM94 [ NCBI-GEO ]   TMEM94 [ EBI - ARRAY_EXPRESS ]   TMEM94 [ SEEK ]   TMEM94 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM94 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9772
GTEX Portal (Tissue expression)TMEM94
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ12767   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ12767  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ12767
Splice isoforms : SwissVarQ12767
PhosPhoSitePlusQ12767
Domains : Interpro (EBI)ATPase_P-typ_cation-transptr_C    ATPase_P-typ_TM_dom   
Domain families : Pfam (Sanger)Cation_ATPase_C (PF00689)   
Domain families : Pfam (NCBI)pfam00689   
Conserved Domain (NCBI)TMEM94
DMDM Disease mutations9772
Blocks (Seattle)TMEM94
SuperfamilyQ12767
Human Protein AtlasENSG00000177728
Peptide AtlasQ12767
HPRD11068
IPIIPI00783211   IPI00431263   IPI01013882   
Protein Interaction databases
DIP (DOE-UCLA)Q12767
IntAct (EBI)Q12767
FunCoupENSG00000177728
BioGRIDTMEM94
STRING (EMBL)TMEM94
ZODIACTMEM94
Ontologies - Pathways
QuickGOQ12767
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM94
Atlas of Cancer Signalling NetworkTMEM94
Wikipedia pathwaysTMEM94
Orthology - Evolution
OrthoDB9772
GeneTree (enSembl)ENSG00000177728
Phylogenetic Trees/Animal Genes : TreeFamTMEM94
HOVERGENQ12767
HOGENOMQ12767
Homologs : HomoloGeneTMEM94
Homology/Alignments : Family Browser (UCSC)TMEM94
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM94 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM94
dbVarTMEM94
ClinVarTMEM94
1000_GenomesTMEM94 
Exome Variant ServerTMEM94
ExAC (Exome Aggregation Consortium)TMEM94 (select the gene name)
Genetic variants : HAPMAP9772
Genomic Variants (DGV)TMEM94 [DGVbeta]
DECIPHERTMEM94 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM94 
Mutations
ICGC Data PortalTMEM94 
TCGA Data PortalTMEM94 
Broad Tumor PortalTMEM94
OASIS PortalTMEM94 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM94
BioMutasearch TMEM94
DgiDB (Drug Gene Interaction Database)TMEM94
DoCM (Curated mutations)TMEM94 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM94 (select a term)
intoGenTMEM94
Cancer3DTMEM94(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM94
Genetic Testing Registry TMEM94
NextProtQ12767 [Medical]
TSGene9772
GENETestsTMEM94
Target ValidationTMEM94
Huge Navigator TMEM94 [HugePedia]
snp3D : Map Gene to Disease9772
BioCentury BCIQTMEM94
ClinGenTMEM94
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9772
Chemical/Pharm GKB GenePA142671623
Clinical trialTMEM94
Miscellaneous
canSAR (ICR)TMEM94 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM94
EVEXTMEM94
GoPubMedTMEM94
iHOPTMEM94
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:46:32 CEST 2017

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