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TMOD2 (tropomodulin 2)

Identity

Alias (NCBI)N-TMOD
NTMOD
HGNC (Hugo) TMOD2
HGNC Alias symbNTMOD
HGNC Alias nameneuronal tropomodulin
LocusID (NCBI) 29767
Atlas_Id 43601
Location 15q21.2  [Link to chromosome band 15q21]
Location_base_pair Starts at 51751597 and ends at 51816361 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NPIPB7 (16q23.1) / TMOD2 (15q21.2)UNC5D (8p12) / TMOD2 (15q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMOD2   11872
Cards
Entrez_Gene (NCBI)TMOD2    tropomodulin 2
AliasesN-TMOD; NTMOD
GeneCards (Weizmann)TMOD2
Ensembl hg19 (Hinxton)ENSG00000128872 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000128872 [Gene_View]  ENSG00000128872 [Sequence]  chr15:51751597-51816361 [Contig_View]  TMOD2 [Vega]
ICGC DataPortalENSG00000128872
TCGA cBioPortalTMOD2
AceView (NCBI)TMOD2
Genatlas (Paris)TMOD2
SOURCE (Princeton)TMOD2
Genetics Home Reference (NIH)TMOD2
Genomic and cartography
GoldenPath hg38 (UCSC)TMOD2  -     chr15:51751597-51816361 +  15q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMOD2  -     15q21.2   [Description]    (hg19-Feb_2009)
GoldenPathTMOD2 - 15q21.2 [CytoView hg19]  TMOD2 - 15q21.2 [CytoView hg38]
ImmunoBaseENSG00000128872
Genome Data Viewer NCBITMOD2 [Mapview hg19]  
OMIM602928   
Gene and transcription
Genbank (Entrez)AB073658 AF177169 AK021496 AK025346 AK124907
RefSeq transcript (Entrez)NM_001142885 NM_014548
Consensus coding sequences : CCDS (NCBI)TMOD2
Gene ExpressionTMOD2 [ NCBI-GEO ]   TMOD2 [ EBI - ARRAY_EXPRESS ]   TMOD2 [ SEEK ]   TMOD2 [ MEM ]
Gene Expression Viewer (FireBrowse)TMOD2 [ Firebrowse - Broad ]
GenevisibleExpression of TMOD2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29767
GTEX Portal (Tissue expression)TMOD2
Human Protein AtlasENSG00000128872-TMOD2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZR1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NZR1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NZR1
PhosPhoSitePlusQ9NZR1
Domains : Interpro (EBI)LRR_dom_sf    TMOD    TMOD2   
Domain families : Pfam (Sanger)Tropomodulin (PF03250)   
Domain families : Pfam (NCBI)pfam03250   
Conserved Domain (NCBI)TMOD2
SuperfamilyQ9NZR1
AlphaFold pdb e-kbQ9NZR1   
Human Protein Atlas [tissue]ENSG00000128872-TMOD2 [tissue]
HPRD04237
Protein Interaction databases
DIP (DOE-UCLA)Q9NZR1
IntAct (EBI)Q9NZR1
BioGRIDTMOD2
STRING (EMBL)TMOD2
ZODIACTMOD2
Ontologies - Pathways
QuickGOQ9NZR1
Ontology : AmiGOactin binding  protein binding  tropomyosin binding  cytoskeleton  striated muscle thin filament  muscle contraction  actin filament organization  neuron-neuron synaptic transmission  nervous system development  learning or memory  myofibril  myofibril assembly  growth cone  synapse  positive regulation of G protein-coupled receptor signaling pathway  pointed-end actin filament capping  
Ontology : EGO-EBIactin binding  protein binding  tropomyosin binding  cytoskeleton  striated muscle thin filament  muscle contraction  actin filament organization  neuron-neuron synaptic transmission  nervous system development  learning or memory  myofibril  myofibril assembly  growth cone  synapse  positive regulation of G protein-coupled receptor signaling pathway  pointed-end actin filament capping  
NDEx NetworkTMOD2
Atlas of Cancer Signalling NetworkTMOD2
Wikipedia pathwaysTMOD2
Orthology - Evolution
OrthoDB29767
GeneTree (enSembl)ENSG00000128872
Phylogenetic Trees/Animal Genes : TreeFamTMOD2
Homologs : HomoloGeneTMOD2
Homology/Alignments : Family Browser (UCSC)TMOD2
Gene fusions - Rearrangements
Fusion : QuiverTMOD2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMOD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMOD2
dbVarTMOD2
ClinVarTMOD2
MonarchTMOD2
1000_GenomesTMOD2 
Exome Variant ServerTMOD2
GNOMAD BrowserENSG00000128872
Varsome BrowserTMOD2
ACMGTMOD2 variants
VarityQ9NZR1
Genomic Variants (DGV)TMOD2 [DGVbeta]
DECIPHERTMOD2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMOD2 
Mutations
ICGC Data PortalTMOD2 
TCGA Data PortalTMOD2 
Broad Tumor PortalTMOD2
OASIS PortalTMOD2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMOD2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMOD2
Mutations and Diseases : HGMDTMOD2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMOD2
DgiDB (Drug Gene Interaction Database)TMOD2
DoCM (Curated mutations)TMOD2
CIViC (Clinical Interpretations of Variants in Cancer)TMOD2
Cancer3DTMOD2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602928   
Orphanet
DisGeNETTMOD2
MedgenTMOD2
Genetic Testing Registry TMOD2
NextProtQ9NZR1 [Medical]
GENETestsTMOD2
Target ValidationTMOD2
Huge Navigator TMOD2 [HugePedia]
ClinGenTMOD2
Clinical trials, drugs, therapy
MyCancerGenomeTMOD2
Protein Interactions : CTDTMOD2
Pharm GKB GenePA36573
PharosQ9NZR1
Clinical trialTMOD2
Miscellaneous
canSAR (ICR)TMOD2
HarmonizomeTMOD2
DataMed IndexTMOD2
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMOD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:35:36 CEST 2021

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