Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TMPRSS11BNL (TMPRSS11B N-terminal like, pseudogene)

Identity

Alias_namesTMPRSS11B N terminal-like
TMPRSS11B N-terminal like
Alias_symbol (synonym)FLJ41562
Other alias-
HGNC (Hugo) TMPRSS11BNL
LocusID (NCBI) 401136
Atlas_Id 75008
Location 4q13.2  [Link to chromosome band 4q13]
Location_base_pair Starts at 69054242 and ends at 69083798 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMPRSS11BNL   37262
Cards
Entrez_Gene (NCBI)TMPRSS11BNL  401136  TMPRSS11B N-terminal like, pseudogene
Aliases
GeneCards (Weizmann)TMPRSS11BNL
Ensembl hg19 (Hinxton)ENSG00000250026 [Gene_View]  chr4:69054242-69083798 [Contig_View]  TMPRSS11BNL [Vega]
Ensembl hg38 (Hinxton)ENSG00000250026 [Gene_View]  chr4:69054242-69083798 [Contig_View]  TMPRSS11BNL [Vega]
ICGC DataPortalENSG00000250026
TCGA cBioPortalTMPRSS11BNL
AceView (NCBI)TMPRSS11BNL
Genatlas (Paris)TMPRSS11BNL
WikiGenes401136
SOURCE (Princeton)TMPRSS11BNL
Genetics Home Reference (NIH)TMPRSS11BNL
Genomic and cartography
GoldenPath hg19 (UCSC)TMPRSS11BNL  -     chr4:69054242-69083798 -  4q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMPRSS11BNL  -     4q13.2   [Description]    (hg38-Dec_2013)
EnsemblTMPRSS11BNL - 4q13.2 [CytoView hg19]  TMPRSS11BNL - 4q13.2 [CytoView hg38]
Mapping of homologs : NCBITMPRSS11BNL [Mapview hg19]  TMPRSS11BNL [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123556
RefSeq transcript (Entrez)NM_001129907
RefSeq genomic (Entrez)NC_000004 NC_018915 NG_025118 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)TMPRSS11BNL
Cluster EST : UnigeneHs.652046 [ NCBI ]
CGAP (NCI)Hs.652046
Alternative Splicing GalleryENSG00000250026
Gene ExpressionTMPRSS11BNL [ NCBI-GEO ]   TMPRSS11BNL [ EBI - ARRAY_EXPRESS ]   TMPRSS11BNL [ SEEK ]   TMPRSS11BNL [ MEM ]
Gene Expression Viewer (FireBrowse)TMPRSS11BNL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401136
GTEX Portal (Tissue expression)TMPRSS11BNL
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMPRSS11BNL
DMDM Disease mutations401136
Blocks (Seattle)TMPRSS11BNL
Human Protein AtlasENSG00000250026
IPIIPI00746272   
Protein Interaction databases
FunCoupENSG00000250026
BioGRIDTMPRSS11BNL
STRING (EMBL)TMPRSS11BNL
ZODIACTMPRSS11BNL
Ontologies - Pathways
Huge Navigator TMPRSS11BNL [HugePedia]
snp3D : Map Gene to Disease401136
BioCentury BCIQTMPRSS11BNL
ClinGenTMPRSS11BNL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401136
Chemical/Pharm GKB GenePA165664737
Clinical trialTMPRSS11BNL
Miscellaneous
canSAR (ICR)TMPRSS11BNL (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMPRSS11BNL
EVEXTMPRSS11BNL
GoPubMedTMPRSS11BNL
iHOPTMPRSS11BNL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:49:10 CET 2017

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