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TMPRSS11GP (transmembrane protease, serine 11G, pseudogene)

Identity

Other alias-
HGNC (Hugo) TMPRSS11GP
LocusID (NCBI) 644759
Atlas_Id 75012
Location 4q13.2  [Link to chromosome band 4q13]
Location_base_pair Starts at 67991812 and ends at 67997439 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMPRSS11GP   42983
Cards
Entrez_Gene (NCBI)TMPRSS11GP  644759  transmembrane protease, serine 11G, pseudogene
Aliases
GeneCards (Weizmann)TMPRSS11GP
Ensembl hg19 (Hinxton)ENSG00000229009 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229009 [Gene_View]  chr4:67991812-67997439 [Contig_View]  TMPRSS11GP [Vega]
ICGC DataPortalENSG00000229009
TCGA cBioPortalTMPRSS11GP
AceView (NCBI)TMPRSS11GP
Genatlas (Paris)TMPRSS11GP
WikiGenes644759
SOURCE (Princeton)TMPRSS11GP
Genetics Home Reference (NIH)TMPRSS11GP
Genomic and cartography
GoldenPath hg38 (UCSC)TMPRSS11GP  -     chr4:67991812-67997439 -  4q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMPRSS11GP  -     4q13.2   [Description]    (hg19-Feb_2009)
EnsemblTMPRSS11GP - 4q13.2 [CytoView hg19]  TMPRSS11GP - 4q13.2 [CytoView hg38]
Mapping of homologs : NCBITMPRSS11GP [Mapview hg19]  TMPRSS11GP [Mapview hg38]
Gene and transcription
Genbank (Entrez)EG328686
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMPRSS11GP
Cluster EST : UnigeneHs.646883 [ NCBI ]
CGAP (NCI)Hs.646883
Alternative Splicing GalleryENSG00000229009
Gene ExpressionTMPRSS11GP [ NCBI-GEO ]   TMPRSS11GP [ EBI - ARRAY_EXPRESS ]   TMPRSS11GP [ SEEK ]   TMPRSS11GP [ MEM ]
Gene Expression Viewer (FireBrowse)TMPRSS11GP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644759
GTEX Portal (Tissue expression)TMPRSS11GP
Human Protein AtlasENSG00000229009-TMPRSS11GP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMPRSS11GP
DMDM Disease mutations644759
Blocks (Seattle)TMPRSS11GP
Human Protein Atlas [tissue]ENSG00000229009-TMPRSS11GP [tissue]
Protein Interaction databases
FunCoupENSG00000229009
BioGRIDTMPRSS11GP
STRING (EMBL)TMPRSS11GP
ZODIACTMPRSS11GP
Ontologies - Pathways
Huge Navigator TMPRSS11GP [HugePedia]
snp3D : Map Gene to Disease644759
BioCentury BCIQTMPRSS11GP
ClinGenTMPRSS11GP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644759
Clinical trialTMPRSS11GP
Miscellaneous
canSAR (ICR)TMPRSS11GP (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMPRSS11GP
EVEXTMPRSS11GP
GoPubMedTMPRSS11GP
iHOPTMPRSS11GP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:11:06 CET 2017

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