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TMSB15B (thymosin beta 15B)

Identity

Alias (NCBI)TMSB15A
TMSL8
TMSNB
Tbeta15b
HGNC (Hugo) TMSB15B
HGNC Alias symbMGC39900
LocusID (NCBI) 286527
Atlas_Id 50905
Location Xq22.2  [Link to chromosome band Xq22]
Location_base_pair Starts at 103962627 and ends at 103965976 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMSB15B   28612
Cards
Entrez_Gene (NCBI)TMSB15B    thymosin beta 15B
AliasesTMSB15A; TMSL8; TMSNB; Tbeta15b
GeneCards (Weizmann)TMSB15B
Ensembl hg19 (Hinxton)ENSG00000158427 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158427 [Gene_View]  ENSG00000158427 [Sequence]  chrX:103962627-103965976 [Contig_View]  TMSB15B [Vega]
ICGC DataPortalENSG00000158427
TCGA cBioPortalTMSB15B
AceView (NCBI)TMSB15B
Genatlas (Paris)TMSB15B
SOURCE (Princeton)TMSB15B
Genetics Home Reference (NIH)TMSB15B
Genomic and cartography
GoldenPath hg38 (UCSC)TMSB15B  -     chrX:103962627-103965976 +  Xq22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMSB15B  -     Xq22.2   [Description]    (hg19-Feb_2009)
GoldenPathTMSB15B - Xq22.2 [CytoView hg19]  TMSB15B - Xq22.2 [CytoView hg38]
ImmunoBaseENSG00000158427
Genome Data Viewer NCBITMSB15B [Mapview hg19]  
OMIM301011   
Gene and transcription
Genbank (Entrez)AK090973 AK291479 BC019900 BC035660 BC054476
RefSeq transcript (Entrez)NM_001350211 NM_001350212 NM_001350213 NM_194324
Consensus coding sequences : CCDS (NCBI)TMSB15B
Gene ExpressionTMSB15B [ NCBI-GEO ]   TMSB15B [ EBI - ARRAY_EXPRESS ]   TMSB15B [ SEEK ]   TMSB15B [ MEM ]
Gene Expression Viewer (FireBrowse)TMSB15B [ Firebrowse - Broad ]
GenevisibleExpression of TMSB15B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286527
GTEX Portal (Tissue expression)TMSB15B
Human Protein AtlasENSG00000158427-TMSB15B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CG35   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CG35  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CG35
PhosPhoSitePlusP0CG35
Domaine pattern : Prosite (Expaxy)THYMOSIN_B4 (PS00500)   
Domains : Interpro (EBI)Beta-thymosin    Beta-thymosin_sf   
Domain families : Pfam (Sanger)Thymosin (PF01290)   
Domain families : Pfam (NCBI)pfam01290   
Domain families : Smart (EMBL)THY (SM00152)  
Conserved Domain (NCBI)TMSB15B
SuperfamilyP0CG35
AlphaFold pdb e-kbP0CG35   
Human Protein Atlas [tissue]ENSG00000158427-TMSB15B [tissue]
HPRD17546
Protein Interaction databases
DIP (DOE-UCLA)P0CG35
IntAct (EBI)P0CG35
BioGRIDTMSB15B
STRING (EMBL)TMSB15B
ZODIACTMSB15B
Ontologies - Pathways
QuickGOP0CG35
Ontology : AmiGOmolecular_function  actin monomer binding  cellular_component  cytoplasm  cytoskeleton  actin filament organization  regulation of cell migration  positive regulation of cell migration  sequestering of actin monomers  
Ontology : EGO-EBImolecular_function  actin monomer binding  cellular_component  cytoplasm  cytoskeleton  actin filament organization  regulation of cell migration  positive regulation of cell migration  sequestering of actin monomers  
NDEx NetworkTMSB15B
Atlas of Cancer Signalling NetworkTMSB15B
Wikipedia pathwaysTMSB15B
Orthology - Evolution
OrthoDB286527
GeneTree (enSembl)ENSG00000158427
Phylogenetic Trees/Animal Genes : TreeFamTMSB15B
Homologs : HomoloGeneTMSB15B
Homology/Alignments : Family Browser (UCSC)TMSB15B
Gene fusions - Rearrangements
Fusion : QuiverTMSB15B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMSB15B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMSB15B
dbVarTMSB15B
ClinVarTMSB15B
MonarchTMSB15B
1000_GenomesTMSB15B 
Exome Variant ServerTMSB15B
GNOMAD BrowserENSG00000158427
Varsome BrowserTMSB15B
ACMGTMSB15B variants
VarityP0CG35
Genomic Variants (DGV)TMSB15B [DGVbeta]
DECIPHERTMSB15B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMSB15B 
Mutations
ICGC Data PortalTMSB15B 
TCGA Data PortalTMSB15B 
Broad Tumor PortalTMSB15B
OASIS PortalTMSB15B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMSB15B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMSB15B
Mutations and Diseases : HGMDTMSB15B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMSB15B
DgiDB (Drug Gene Interaction Database)TMSB15B
DoCM (Curated mutations)TMSB15B
CIViC (Clinical Interpretations of Variants in Cancer)TMSB15B
Cancer3DTMSB15B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM301011   
Orphanet
DisGeNETTMSB15B
MedgenTMSB15B
Genetic Testing Registry TMSB15B
NextProtP0CG35 [Medical]
GENETestsTMSB15B
Target ValidationTMSB15B
Huge Navigator TMSB15B [HugePedia]
ClinGenTMSB15B
Clinical trials, drugs, therapy
MyCancerGenomeTMSB15B
Protein Interactions : CTDTMSB15B
Pharm GKB GenePA164726584
PharosP0CG35
Clinical trialTMSB15B
Miscellaneous
canSAR (ICR)TMSB15B
HarmonizomeTMSB15B
DataMed IndexTMSB15B
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMSB15B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:35:38 CEST 2021

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