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TMSB15B (thymosin beta 15B)

Identity

Alias_symbol (synonym)MGC39900
Other aliasTbeta15b
HGNC (Hugo) TMSB15B
LocusID (NCBI) 286527
Atlas_Id 50905
Location Xq22.2  [Link to chromosome band Xq22]
Location_base_pair Starts at 103918896 and ends at 103965990 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMSB15B   28612
Cards
Entrez_Gene (NCBI)TMSB15B  286527  thymosin beta 15B
AliasesTbeta15b
GeneCards (Weizmann)TMSB15B
Ensembl hg19 (Hinxton)ENSG00000158427 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158427 [Gene_View]  chrX:103918896-103965990 [Contig_View]  TMSB15B [Vega]
ICGC DataPortalENSG00000158427
TCGA cBioPortalTMSB15B
AceView (NCBI)TMSB15B
Genatlas (Paris)TMSB15B
WikiGenes286527
SOURCE (Princeton)TMSB15B
Genetics Home Reference (NIH)TMSB15B
Genomic and cartography
GoldenPath hg38 (UCSC)TMSB15B  -     chrX:103918896-103965990 +  Xq22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMSB15B  -     Xq22.2   [Description]    (hg19-Feb_2009)
EnsemblTMSB15B - Xq22.2 [CytoView hg19]  TMSB15B - Xq22.2 [CytoView hg38]
Mapping of homologs : NCBITMSB15B [Mapview hg19]  TMSB15B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090973 AK291479 BC019900 BC035660 BC054476
RefSeq transcript (Entrez)NM_001350211 NM_001350212 NM_001350213 NM_194324
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMSB15B
Cluster EST : UnigeneHs.709594 [ NCBI ]
CGAP (NCI)Hs.709594
Alternative Splicing GalleryENSG00000158427
Gene ExpressionTMSB15B [ NCBI-GEO ]   TMSB15B [ EBI - ARRAY_EXPRESS ]   TMSB15B [ SEEK ]   TMSB15B [ MEM ]
Gene Expression Viewer (FireBrowse)TMSB15B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286527
GTEX Portal (Tissue expression)TMSB15B
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CG35   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CG35  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CG35
Splice isoforms : SwissVarP0CG35
PhosPhoSitePlusP0CG35
Domaine pattern : Prosite (Expaxy)THYMOSIN_B4 (PS00500)   
Domains : Interpro (EBI)Beta-thymosin   
Domain families : Pfam (Sanger)Thymosin (PF01290)   
Domain families : Pfam (NCBI)pfam01290   
Domain families : Smart (EMBL)THY (SM00152)  
Domain structure : Prodom (Prabi Lyon)Thymosin_b4 (PD005116)   
Conserved Domain (NCBI)TMSB15B
DMDM Disease mutations286527
Blocks (Seattle)TMSB15B
SuperfamilyP0CG35
Human Protein AtlasENSG00000158427
Peptide AtlasP0CG35
HPRD17546
Protein Interaction databases
DIP (DOE-UCLA)P0CG35
IntAct (EBI)P0CG35
FunCoupENSG00000158427
BioGRIDTMSB15B
STRING (EMBL)TMSB15B
ZODIACTMSB15B
Ontologies - Pathways
QuickGOP0CG35
Ontology : AmiGOactin monomer binding  cytoplasm  cytoskeleton  actin filament organization  
Ontology : EGO-EBIactin monomer binding  cytoplasm  cytoskeleton  actin filament organization  
NDEx NetworkTMSB15B
Atlas of Cancer Signalling NetworkTMSB15B
Wikipedia pathwaysTMSB15B
Orthology - Evolution
OrthoDB286527
GeneTree (enSembl)ENSG00000158427
Phylogenetic Trees/Animal Genes : TreeFamTMSB15B
HOVERGENP0CG35
HOGENOMP0CG35
Homologs : HomoloGeneTMSB15B
Homology/Alignments : Family Browser (UCSC)TMSB15B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMSB15B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMSB15B
dbVarTMSB15B
ClinVarTMSB15B
1000_GenomesTMSB15B 
Exome Variant ServerTMSB15B
ExAC (Exome Aggregation Consortium)TMSB15B (select the gene name)
Genetic variants : HAPMAP286527
Genomic Variants (DGV)TMSB15B [DGVbeta]
DECIPHERTMSB15B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMSB15B 
Mutations
ICGC Data PortalTMSB15B 
TCGA Data PortalTMSB15B 
Broad Tumor PortalTMSB15B
OASIS PortalTMSB15B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMSB15B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMSB15B
DgiDB (Drug Gene Interaction Database)TMSB15B
DoCM (Curated mutations)TMSB15B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMSB15B (select a term)
intoGenTMSB15B
Cancer3DTMSB15B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMSB15B
Genetic Testing Registry TMSB15B
NextProtP0CG35 [Medical]
TSGene286527
GENETestsTMSB15B
Target ValidationTMSB15B
Huge Navigator TMSB15B [HugePedia]
snp3D : Map Gene to Disease286527
BioCentury BCIQTMSB15B
ClinGenTMSB15B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286527
Chemical/Pharm GKB GenePA164726584
Clinical trialTMSB15B
Miscellaneous
canSAR (ICR)TMSB15B (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMSB15B
EVEXTMSB15B
GoPubMedTMSB15B
iHOPTMSB15B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:59:53 CEST 2017

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