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TNFRSF13C (TNF receptor superfamily member 13C)

Identity

Alias_namestumor necrosis factor receptor superfamily, member 13C
Alias_symbol (synonym)BAFFR
CD268
Other aliasBAFF-R
BROMIX
CVID4
prolixin
HGNC (Hugo) TNFRSF13C
LocusID (NCBI) 115650
Atlas_Id 42614
Location 22q13.2  [Link to chromosome band 22q13]
Location_base_pair Starts at 41925032 and ends at 41926817 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TNFRSF13C   17755
LRG (Locus Reference Genomic)LRG_184
Cards
Entrez_Gene (NCBI)TNFRSF13C  115650  TNF receptor superfamily member 13C
AliasesBAFF-R; BAFFR; BROMIX; CD268; 
CVID4; prolixin
GeneCards (Weizmann)TNFRSF13C
Ensembl hg19 (Hinxton)ENSG00000159958 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159958 [Gene_View]  ENSG00000159958 [Sequence]  chr22:41925032-41926817 [Contig_View]  TNFRSF13C [Vega]
ICGC DataPortalENSG00000159958
TCGA cBioPortalTNFRSF13C
AceView (NCBI)TNFRSF13C
Genatlas (Paris)TNFRSF13C
WikiGenes115650
SOURCE (Princeton)TNFRSF13C
Genetics Home Reference (NIH)TNFRSF13C
Genomic and cartography
GoldenPath hg38 (UCSC)TNFRSF13C  -     chr22:41925032-41926817 -  22q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TNFRSF13C  -     22q13.2   [Description]    (hg19-Feb_2009)
GoldenPathTNFRSF13C - 22q13.2 [CytoView hg19]  TNFRSF13C - 22q13.2 [CytoView hg38]
ImmunoBaseENSG00000159958
Mapping of homologs : NCBITNFRSF13C [Mapview hg19]  TNFRSF13C [Mapview hg38]
OMIM240500   606269   613494   
Gene and transcription
Genbank (Entrez)AF373846 AX772914 AX800072 BC105123 BC112030
RefSeq transcript (Entrez)NM_052945
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TNFRSF13C
Alternative Splicing GalleryENSG00000159958
Gene ExpressionTNFRSF13C [ NCBI-GEO ]   TNFRSF13C [ EBI - ARRAY_EXPRESS ]   TNFRSF13C [ SEEK ]   TNFRSF13C [ MEM ]
Gene Expression Viewer (FireBrowse)TNFRSF13C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)115650
GTEX Portal (Tissue expression)TNFRSF13C
Human Protein AtlasENSG00000159958-TNFRSF13C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TNFRSF13C
DMDM Disease mutations115650
Blocks (Seattle)TNFRSF13C
Human Protein Atlas [tissue]ENSG00000159958-TNFRSF13C [tissue]
HPRD05883
IPIIPI00045337   IPI00218927   
Protein Interaction databases
FunCoupENSG00000159958
BioGRIDTNFRSF13C
STRING (EMBL)TNFRSF13C
ZODIACTNFRSF13C
Ontologies - Pathways
Huge Navigator TNFRSF13C [HugePedia]
snp3D : Map Gene to Disease115650
BioCentury BCIQTNFRSF13C
ClinGenTNFRSF13C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD115650
Chemical/Pharm GKB GenePA38466
Clinical trialTNFRSF13C
Miscellaneous
canSAR (ICR)TNFRSF13C (select the gene name)
DataMed IndexTNFRSF13C
Probes
Litterature
PubMed87 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTNFRSF13C
EVEXTNFRSF13C
GoPubMedTNFRSF13C
iHOPTNFRSF13C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 19 17:13:37 CET 2020

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