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TNFRSF14-AS1 (TNFRSF14 antisense RNA 1)

Identity

Alias_symbol (synonym)ENST00000416860.2
Other alias-
HGNC (Hugo) TNFRSF14-AS1
LocusID (NCBI) 115110
Atlas_Id 79824
Location 1p36.32  [Link to chromosome band 1p36]
Location_base_pair Starts at 2549920 and ends at 2557011 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TNFRSF14-AS1   26966
Cards
Entrez_Gene (NCBI)TNFRSF14-AS1  115110  TNFRSF14 antisense RNA 1
Aliases
GeneCards (Weizmann)TNFRSF14-AS1
Ensembl hg19 (Hinxton)ENSG00000238164 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238164 [Gene_View]  chr1:2549920-2557011 [Contig_View]  TNFRSF14-AS1 [Vega]
ICGC DataPortalENSG00000238164
TCGA cBioPortalTNFRSF14-AS1
AceView (NCBI)TNFRSF14-AS1
Genatlas (Paris)TNFRSF14-AS1
WikiGenes115110
SOURCE (Princeton)TNFRSF14-AS1
Genetics Home Reference (NIH)TNFRSF14-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TNFRSF14-AS1  -     chr1:2549920-2557011 -  1p36.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TNFRSF14-AS1  -     1p36.32   [Description]    (hg19-Feb_2009)
EnsemblTNFRSF14-AS1 - 1p36.32 [CytoView hg19]  TNFRSF14-AS1 - 1p36.32 [CytoView hg38]
Mapping of homologs : NCBITNFRSF14-AS1 [Mapview hg19]  TNFRSF14-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI469921 AK021767 AK128532 AL359943 BC101995
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_187515
Consensus coding sequences : CCDS (NCBI)TNFRSF14-AS1
Cluster EST : UnigeneHs.132272 [ NCBI ]
CGAP (NCI)Hs.132272
Alternative Splicing GalleryENSG00000238164
Gene ExpressionTNFRSF14-AS1 [ NCBI-GEO ]   TNFRSF14-AS1 [ EBI - ARRAY_EXPRESS ]   TNFRSF14-AS1 [ SEEK ]   TNFRSF14-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TNFRSF14-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)115110
GTEX Portal (Tissue expression)TNFRSF14-AS1
Human Protein AtlasENSG00000238164-TNFRSF14-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TNFRSF14-AS1
DMDM Disease mutations115110
Blocks (Seattle)TNFRSF14-AS1
Human Protein Atlas [tissue]ENSG00000238164-TNFRSF14-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000238164
BioGRIDTNFRSF14-AS1
STRING (EMBL)TNFRSF14-AS1
ZODIACTNFRSF14-AS1
Ontologies - Pathways
Huge Navigator TNFRSF14-AS1 [HugePedia]
snp3D : Map Gene to Disease115110
BioCentury BCIQTNFRSF14-AS1
ClinGenTNFRSF14-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD115110
Clinical trialTNFRSF14-AS1
Miscellaneous
canSAR (ICR)TNFRSF14-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTNFRSF14-AS1
EVEXTNFRSF14-AS1
GoPubMedTNFRSF14-AS1
iHOPTNFRSF14-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:03:29 CET 2017

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