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TNFRSF14 (TNF receptor superfamily member 14)

Identity

Alias_namestumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
tumor necrosis factor receptor superfamily, member 14
Alias_symbol (synonym)HVEM
ATAR
TR2
LIGHTR
HVEA
CD270
Other alias
HGNC (Hugo) TNFRSF14
LocusID (NCBI) 8764
Atlas_Id 42615
Location 1p36.32  [Link to chromosome band 1p36]
Location_base_pair Starts at 2556365 and ends at 2565622 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TNFRSF14 (1p36.32) / C1QA (1p36.12)TNFRSF14 (1p36.32) / MICAL1 (6q21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas)

Leukemias PediatrFLID1749


External links

Nomenclature
HGNC (Hugo)TNFRSF14   11912
Cards
Entrez_Gene (NCBI)TNFRSF14  8764  TNF receptor superfamily member 14
AliasesATAR; CD270; HVEA; HVEM; 
LIGHTR; TR2
GeneCards (Weizmann)TNFRSF14
Ensembl hg19 (Hinxton)ENSG00000157873 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000157873 [Gene_View]  ENSG00000157873 [Sequence]  chr1:2556365-2565622 [Contig_View]  TNFRSF14 [Vega]
ICGC DataPortalENSG00000157873
TCGA cBioPortalTNFRSF14
AceView (NCBI)TNFRSF14
Genatlas (Paris)TNFRSF14
WikiGenes8764
SOURCE (Princeton)TNFRSF14
Genetics Home Reference (NIH)TNFRSF14
Genomic and cartography
GoldenPath hg38 (UCSC)TNFRSF14  -     chr1:2556365-2565622 +  1p36.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TNFRSF14  -     1p36.32   [Description]    (hg19-Feb_2009)
GoldenPathTNFRSF14 - 1p36.32 [CytoView hg19]  TNFRSF14 - 1p36.32 [CytoView hg38]
ImmunoBaseENSG00000157873
Mapping of homologs : NCBITNFRSF14 [Mapview hg19]  TNFRSF14 [Mapview hg38]
OMIM602746   
Gene and transcription
Genbank (Entrez)AB208808 AF153978 AF373877 AF373878 AK124010
RefSeq transcript (Entrez)NM_001297605 NM_003820
RefSeq genomic (Entrez)NC_000001 NG_047096 NT_187515
Consensus coding sequences : CCDS (NCBI)TNFRSF14
Alternative Splicing GalleryENSG00000157873
Gene ExpressionTNFRSF14 [ NCBI-GEO ]   TNFRSF14 [ EBI - ARRAY_EXPRESS ]   TNFRSF14 [ SEEK ]   TNFRSF14 [ MEM ]
Gene Expression Viewer (FireBrowse)TNFRSF14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)8764
GTEX Portal (Tissue expression)TNFRSF14
Human Protein AtlasENSG00000157873-TNFRSF14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TNFRSF14
DMDM Disease mutations8764
Blocks (Seattle)TNFRSF14
Human Protein Atlas [tissue]ENSG00000157873-TNFRSF14 [tissue]
HPRD04122
IPIIPI00024331   IPI00384412   IPI00911011   IPI00556085   IPI00916996   IPI00916056   IPI00916172   
Protein Interaction databases
FunCoupENSG00000157873
BioGRIDTNFRSF14
STRING (EMBL)TNFRSF14
ZODIACTNFRSF14
Ontologies - Pathways
Huge Navigator TNFRSF14 [HugePedia]
snp3D : Map Gene to Disease8764
BioCentury BCIQTNFRSF14
ClinGenTNFRSF14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8764
Chemical/Pharm GKB GenePA36605
Clinical trialTNFRSF14
Miscellaneous
canSAR (ICR)TNFRSF14 (select the gene name)
DataMed IndexTNFRSF14
Probes
Litterature
PubMed129 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTNFRSF14
EVEXTNFRSF14
GoPubMedTNFRSF14
iHOPTNFRSF14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:13:37 CET 2020

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