Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TNFSF12-TNFSF13 (TNFSF12-TNFSF13 readthrough)

Identity

Alias_symbol (synonym)TWE-PRIL
Other alias
HGNC (Hugo) TNFSF12-TNFSF13
LocusID (NCBI) 407977
Atlas_Id 42908
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7452375 and ends at 7464925 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FURIN (15q26.1) / TNFSF12-TNFSF13 (17p13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TNFSF12-TNFSF13   33537
Cards
Entrez_Gene (NCBI)TNFSF12-TNFSF13  407977  TNFSF12-TNFSF13 readthrough
AliasesTWE-PRIL
GeneCards (Weizmann)TNFSF12-TNFSF13
Ensembl hg19 (Hinxton)ENSG00000248871 [Gene_View]  chr17:7452375-7464925 [Contig_View]  TNFSF12-TNFSF13 [Vega]
Ensembl hg38 (Hinxton)ENSG00000248871 [Gene_View]  chr17:7452375-7464925 [Contig_View]  TNFSF12-TNFSF13 [Vega]
ICGC DataPortalENSG00000248871
TCGA cBioPortalTNFSF12-TNFSF13
AceView (NCBI)TNFSF12-TNFSF13
Genatlas (Paris)TNFSF12-TNFSF13
WikiGenes407977
SOURCE (Princeton)TNFSF12-TNFSF13
Genetics Home Reference (NIH)TNFSF12-TNFSF13
Genomic and cartography
GoldenPath hg19 (UCSC)TNFSF12-TNFSF13  -     chr17:7452375-7464925 +  17p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TNFSF12-TNFSF13  -     17p13.1   [Description]    (hg38-Dec_2013)
EnsemblTNFSF12-TNFSF13 - 17p13.1 [CytoView hg19]  TNFSF12-TNFSF13 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBITNFSF12-TNFSF13 [Mapview hg19]  TNFSF12-TNFSF13 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI954750 AY081051 BC156811 BQ016244
RefSeq transcript (Entrez)NM_172089
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010718 NW_004929405
Consensus coding sequences : CCDS (NCBI)TNFSF12-TNFSF13
Cluster EST : UnigeneHs.54673 [ NCBI ]
CGAP (NCI)Hs.54673
Alternative Splicing GalleryENSG00000248871
Gene ExpressionTNFSF12-TNFSF13 [ NCBI-GEO ]   TNFSF12-TNFSF13 [ EBI - ARRAY_EXPRESS ]   TNFSF12-TNFSF13 [ SEEK ]   TNFSF12-TNFSF13 [ MEM ]
Gene Expression Viewer (FireBrowse)TNFSF12-TNFSF13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)407977
GTEX Portal (Tissue expression)TNFSF12-TNFSF13
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TNFSF12-TNFSF13
DMDM Disease mutations407977
Blocks (Seattle)TNFSF12-TNFSF13
Human Protein AtlasENSG00000248871
HPRD05128
Protein Interaction databases
FunCoupENSG00000248871
BioGRIDTNFSF12-TNFSF13
STRING (EMBL)TNFSF12-TNFSF13
ZODIACTNFSF12-TNFSF13
Ontologies - Pathways
Huge Navigator TNFSF12-TNFSF13 [HugePedia]
snp3D : Map Gene to Disease407977
BioCentury BCIQTNFSF12-TNFSF13
ClinGenTNFSF12-TNFSF13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD407977
Chemical/Pharm GKB GenePA162406662
Clinical trialTNFSF12-TNFSF13
Miscellaneous
canSAR (ICR)TNFSF12-TNFSF13 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTNFSF12-TNFSF13
EVEXTNFSF12-TNFSF13
GoPubMedTNFSF12-TNFSF13
iHOPTNFSF12-TNFSF13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:31:43 CET 2017

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