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TNRC17 (trinucleotide repeat containing 17)

Identity

Alias (NCBI)CAGL234
HGNC (Hugo) TNRC17
HGNC Alias symbCAGL234
LocusID (NCBI) 27321
Atlas_Id 79900
Location 2q37.2  [Link to chromosome band 2q37]
Location_base_pair Starts at 235513740 and ends at 235517921 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TNRC17   11961
Cards
Entrez_Gene (NCBI)TNRC17    trinucleotide repeat containing 17
AliasesCAGL234
GeneCards (Weizmann)TNRC17
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr2:235513740-235517921 [Contig_View]  TNRC17 [Vega]
TCGA cBioPortalTNRC17
AceView (NCBI)TNRC17
Genatlas (Paris)TNRC17
SOURCE (Princeton)TNRC17
Genetics Home Reference (NIH)TNRC17
Genomic and cartography
GoldenPath hg38 (UCSC)TNRC17  -     chr2:235513740-235517921 -  2q37.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TNRC17  -     2q37.2   [Description]    (hg19-Feb_2009)
GoldenPathTNRC17 - 2q37.2 [CytoView hg19]  TNRC17 - 2q37.2 [CytoView hg38]
Genome Data Viewer NCBITNRC17 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TNRC17
Gene ExpressionTNRC17 [ NCBI-GEO ]   TNRC17 [ EBI - ARRAY_EXPRESS ]   TNRC17 [ SEEK ]   TNRC17 [ MEM ]
Gene Expression Viewer (FireBrowse)TNRC17 [ Firebrowse - Broad ]
GenevisibleExpression of TNRC17 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27321
GTEX Portal (Tissue expression)TNRC17
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TNRC17
Protein Interaction databases
BioGRIDTNRC17
STRING (EMBL)TNRC17
ZODIACTNRC17
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTNRC17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:30 CEST 2021

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