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TNRC17 (trinucleotide repeat containing 17)

Identity

Alias_symbol (synonym)CAGL234
Other alias
HGNC (Hugo) TNRC17
LocusID (NCBI) 27321
Atlas_Id 79900
Location 2q37.2  [Link to chromosome band 2q37]
Location_base_pair Starts at 235513740 and ends at 235517921 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TNRC17   11961
Cards
Entrez_Gene (NCBI)TNRC17  27321  trinucleotide repeat containing 17
AliasesCAGL234
GeneCards (Weizmann)TNRC17
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:235513740-235517921 [Contig_View]  TNRC17 [Vega]
TCGA cBioPortalTNRC17
AceView (NCBI)TNRC17
Genatlas (Paris)TNRC17
WikiGenes27321
SOURCE (Princeton)TNRC17
Genetics Home Reference (NIH)TNRC17
Genomic and cartography
GoldenPath hg38 (UCSC)TNRC17  -     chr2:235513740-235517921 -  2q37.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TNRC17  -     2q37.2   [Description]    (hg19-Feb_2009)
EnsemblTNRC17 - 2q37.2 [CytoView hg19]  TNRC17 - 2q37.2 [CytoView hg38]
Mapping of homologs : NCBITNRC17 [Mapview hg19]  TNRC17 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TNRC17
Gene ExpressionTNRC17 [ NCBI-GEO ]   TNRC17 [ EBI - ARRAY_EXPRESS ]   TNRC17 [ SEEK ]   TNRC17 [ MEM ]
Gene Expression Viewer (FireBrowse)TNRC17 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)27321
GTEX Portal (Tissue expression)TNRC17
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TNRC17
DMDM Disease mutations27321
Blocks (Seattle)TNRC17
Protein Interaction databases
BioGRIDTNRC17
STRING (EMBL)TNRC17
ZODIACTNRC17
Ontologies - Pathways
Huge Navigator TNRC17 [HugePedia]
snp3D : Map Gene to Disease27321
BioCentury BCIQTNRC17
ClinGenTNRC17
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27321
Chemical/Pharm GKB GenePA36648
Clinical trialTNRC17
Miscellaneous
canSAR (ICR)TNRC17 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTNRC17
EVEXTNRC17
GoPubMedTNRC17
iHOPTNRC17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:06:41 CET 2017

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